RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 YIPF7Q8N8F6 280 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 KLHL30-AS1Q8NEE0 82 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 OR56B4Q8NH76 319 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 TMEM163Q8TC26 289 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 RAX2Q96IS3 184 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 DUX3Q96PT4 197 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 TBX5Q99593 518 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 COMMD4Q9H0A8 199 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 EXOSC4Q9NPD3 245 aaKnown RBP7.86□□□□□ -1.15
LIG1-209ENST00000596104 GLS2Q9UI32 602 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 GSTK1Q9Y2Q3 226 aa7.86□□□□□ -1.15
LIG1-209ENST00000596104 A0A1W2PQL4 384 aaPredicted RBP7.85□□□□□ -1.15
LIG1-209ENST00000596104 METTL15A6NJ78 407 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 ZNF729A6NN14 1252 aaPredicted RBP7.85□□□□□ -1.15
LIG1-209ENST00000596104 ZAR1LA6NP61 321 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 SERPINE3A8MV23 424 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 C3orf84H3BNL1 204 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 SH2D1BO14796 132 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 FGF16O43320 207 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 FKBP6O75344 327 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 SULT1C4O75897 302 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 ZFPL1O95159 310 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 CYB5AP00167 134 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 IGHG2P01859 326 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 ATF1P18846 271 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 CALB2P22676 271 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 KIR3DL2P43630 455 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 LUMP51884 338 aaPredicted RBP7.85□□□□□ -1.15
LIG1-209ENST00000596104 MTCP1P56278 107 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 ISL1P61371 349 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 PDZK1IP1Q13113 114 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 RBM39Q14498 530 aaKnown RBP7.85□□□□□ -1.15
LIG1-209ENST00000596104 KPNB1Q14974 876 aaKnown RBP7.85□□□□□ -1.15
LIG1-209ENST00000596104 Q6P435 159 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 UTS2BQ765I0 119 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 GID4Q8IVV7 300 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 ZNF695Q8IW36 515 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 RDH10Q8IZV5 341 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 COMMD1Q8N668 190 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 DRAM1Q8N682 238 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 OR4D6Q8NGJ1 314 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 OR9G1Q8NH87 305 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 TOMM40LQ969M1 308 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 RPEQ96AT9 228 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 NRBF2Q96F24 287 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 KIRREL1Q96J84 757 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 IL4I1Q96RQ9 567 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 PRR25Q96S07 402 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 ADI1Q9BV57 179 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 PRRG3Q9BZD7 231 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 PCDHB16Q9NRJ7 776 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 H2AFY2Q9P0M6 372 aaPredicted RBP7.85□□□□□ -1.15
LIG1-209ENST00000596104 LINC00527Q9UJ94 153 aa7.85□□□□□ -1.15
LIG1-209ENST00000596104 KBTBD11-OT1A0A1B0GTJ5 212 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 CCL24O00175 119 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 SLC33A1O00400 549 aaPredicted RBP7.84□□□□□ -1.15
LIG1-209ENST00000596104 MITFO75030 526 aaPredicted RBP7.84□□□□□ -1.15
LIG1-209ENST00000596104 KDM4BO94953 1096 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 APOL3O95236 402 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 OR2T7P0C7T2 308 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 UBCP0CG48 685 aaKnown RBP7.84□□□□□ -1.15
LIG1-209ENST00000596104 ZNF44P15621 663 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 PRKACBP22694 351 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 GP2P55259 537 aaKnown RBP7.84□□□□□ -1.15
LIG1-209ENST00000596104 GNGT1P63211 74 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 SLC35B1P78383 322 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 DIAPH2-AS1Q14236 149 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 KRBOX4Q5JUW0 171 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 LHFPL2Q6ZUX7 228 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 SLC35E3Q7Z769 313 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 STPG2Q8N412 459 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 RFT1Q96AA3 541 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 SPSB1Q96BD6 273 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 THTPAQ9BU02 230 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 PPIL3Q9H2H8 161 aaKnown RBP7.84□□□□□ -1.15
LIG1-209ENST00000596104 LINC00574Q9H8X3 128 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 ING3Q9NXR8 418 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 OR6C3Q9NZP0 311 aa7.84□□□□□ -1.15
LIG1-209ENST00000596104 WARS2Q9UGM6 360 aaKnown RBP7.84□□□□□ -1.15
LIG1-209ENST00000596104 TENM2Q9NT68 2774 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 TCRBV3S1A0A5B6 114 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 LINC01548A6NM66 108 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 J3QR06 171 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 MT-ND2P03891 347 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 TMEM11P17152 192 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 NFYBP25208 207 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 HTR1FP30939 366 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 GYS2P54840 703 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 HES1Q14469 280 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 HNF4GQ14541 408 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 ATXN7L3Q14CW9 347 aaPredicted RBP7.83□□□□□ -1.16
LIG1-209ENST00000596104 CDK5R1Q15078 307 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 SPATA24Q86W54 205 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 OR8H3Q8N146 312 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 CHST4Q8NCG5 386 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 OR10H4Q8NGA5 316 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 OR51T1Q8NGJ9 327 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 OR5D18Q8NGL1 313 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 OR2G2Q8NGZ5 317 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 LEAP2Q969E1 77 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms