RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ZNF44P15621 663 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 COX7A1P24310 79 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 EEF1B2P24534 225 aaKnown RBP8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 PAX6P26367 422 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 ERP29P30040 261 aaKnown RBP8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 TGFBR2P37173 567 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 SCN1BQ07699 218 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 AESQ08117 197 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 TAF9Q16594 264 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 MIDNQ504T8 468 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 AWAT1Q58HT5 328 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 FAM27D1Q5T7N8 215 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 C16orf87Q6PH81 154 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 TMEM86BQ8N661 226 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 CHST4Q8NCG5 386 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 SSMEM1Q8WWF3 244 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 CPNE2Q96FN4 548 aaPredicted RBP8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 CNBD2Q96M20 576 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 ZNF714Q96N38 554 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 IL36GQ9NZH8 169 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 GLS2Q9UI32 602 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 SF3B6Q9Y3B4 125 aaKnown RBP8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 TPRKBQ9Y3C4 175 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 POMT1Q9Y6A1 747 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 LINC00312Q9Y6C7 94 aa8.94□□□□□ -0.98
SHKBP1-206ENST00000595523 hADV38S2A0JD32 116 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 FAM181BA6NEQ2 426 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 ODF3BA8MYP8 253 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 DEGS1O15121 323 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 RGS10O43665 173 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 SC5DO75845 299 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 IGHV1-8P0DP01 117 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 CFPP27918 469 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 VHLP40337 213 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 GLIPR1P48060 266 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 RELBQ01201 579 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 IL13RA2Q14627 380 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 ATXN7L3Q14CW9 347 aaPredicted RBP8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 RSU1Q15404 277 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 MED22Q15528 200 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 NHLRC3Q5JS37 347 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 LDLRAD2Q5SZI1 272 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 UNQ9370/PRO34162Q6UXP9 181 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 C12orf54Q6X4T0 127 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 NR1H4Q96RI1 486 aaPredicted RBP8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 PPIL3Q9H2H8 161 aaKnown RBP8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 HEXA-AS1Q9H8Q6 139 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 CKLFQ9UBR5 152 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 RAB26Q9ULW5 256 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 FOXJ3Q9UPW0 622 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 FAM96BQ9Y3D0 163 aa8.93□□□□□ -0.98
SHKBP1-206ENST00000595523 WNK1Q9H4A3 2382 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 hCG_1809904A0A1W2PP81 198 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 A0A1W2PPE2 198 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 A0A1W2PR64 198 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 A0A1W2PRV1 198 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 FAM90A8PA6NJQ4 464 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 HSPB6O14558 160 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 CLPXO76031 633 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 HTR3BO95264 441 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 MAS1P04201 325 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 OMGP23515 440 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 GDNFP39905 211 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 MAP2K4P45985 399 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 RBM11P57052 281 aaKnown RBP8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 ACSM3Q53FZ2 586 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 LIPKQ5VXJ0 399 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 ZNF626Q68DY1 528 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 BAIAP2L2Q6UXY1 529 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 PRSS48Q7RTY5 328 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 LHFPL4Q7Z7J7 247 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 DYNAPQ8N1N2 210 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 OSR2Q8N2R0 312 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 BEND2Q8NDZ0 799 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 OR11H6Q8NGC7 330 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 OR4D6Q8NGJ1 314 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 PPP1R35Q8TAP8 253 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 PLPPR1Q8TBJ4 325 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 CORO2AQ92828 525 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 MUL1Q969V5 352 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 TMED9Q9BVK6 235 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 METTL9Q9H1A3 318 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 ING4Q9UNL4 249 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 ST3GAL6Q9Y274 331 aa8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 UBE2J1Q9Y385 318 aaPredicted RBP8.92□□□□□ -0.98
SHKBP1-206ENST00000595523 ODAMA1E959 279 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 MEGF11A6BM72 1044 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 GEMIN2O14893 280 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 GPR137BO60478 399 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 CGB3P0DN86 165 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 CGB7P0DN87 165 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 SERPINA2P20848 420 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 MAPK3P27361 379 aaPredicted RBP8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 RPS25P62851 125 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 PAX5Q02548 391 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 FOXL1Q12952 345 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 GPR50Q13585 617 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 TPBGQ13641 420 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 SLC22A6Q4U2R8 563 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 PAN3Q58A45 887 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms