RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ZNF610Q8N9Z0 462 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 OR5R1Q8NH85 324 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 FGFBP3Q8TAT2 258 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 FNDC9Q8TBE3 224 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 RAB24Q969Q5 203 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 C20orf24Q9BUV8 137 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 SYNGR3O43761 229 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 ADAP1O75689 374 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 JTBO76095 146 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 IGLV3-1P01715 115 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 RPS23P62266 143 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 TMEM128Q5BJH2 165 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 TSPO2Q5TGU0 170 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 TUSC5Q8IXB3 177 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 OR1F12Q8NHA8 337 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 CALHM2Q9HA72 323 aa14.8□□□□□ -0.04
SHKBP1-205ENST00000594973 LOC100509620A0A075B734 347 aa14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 ZNF587BE7ETH6 402 aa14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 CRYGSP22914 178 aa14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 SRSF6Q13247 344 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 UBE2V2Q15819 145 aa14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 ZNF260Q3ZCT1 412 aa14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 CLEC9AQ6UXN8 241 aa14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 FJX1Q86VR8 437 aa14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 PRRG4Q9BZD6 226 aa14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 MRPL37Q9BZE1 423 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 OR10A2Q9H208 303 aa14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 PLA2G2EQ9NZK7 142 aa14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 RIF1Q5UIP0 2472 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-205ENST00000594973 TMEM14DPA8MWL7 114 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 PPP1R2P9O14990 202 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 NME2P1O60361 137 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 COX5BP10606 129 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 ZNF708P17019 499 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 PSG4Q00888 419 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 KISS1Q15726 138 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 SLC22A6Q4U2R8 563 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 RIPPLY2Q5TAB7 128 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 TRAPPC6BQ86SZ2 158 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 HOGA1Q86XE5 327 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 TGIF2LXQ8IUE1 241 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 HIST3H2BBQ8N257 126 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 GVQW1Q8N7I0 195 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 MDS2Q8NDY4 140 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 CCDC54Q8NEL0 328 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 C2orf50Q96LR7 162 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 SLC35B3Q9H1N7 401 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 FAM212BQ9NTI7 297 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 KCNIP3Q9Y2W7 256 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 KLF13Q9Y2Y9 288 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 CBY1Q9Y3M2 126 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 V9GYS6 101 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 CRTAPO75718 401 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 SYNGR4O95473 234 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 LCATP04180 440 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 RAB4AP20338 218 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 ID4P47928 161 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 NUTF2P61970 127 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 ARG2P78540 354 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 OR2A2Q6IF42 318 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 TMPRSS7Q7RTY8 843 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 OR13D1Q8NGV5 346 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 PIGTQ969N2 578 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 MUCL1Q96DR8 90 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 C1orf147Q96MC9 270 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 KCNJ16Q9NPI9 418 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 ZDHHC8Q9ULC8 765 aa14.78□□□□□ -0.04
SHKBP1-205ENST00000594973 KLRC4-KLRK1H3BQV0 150 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 CDC14BO60729 498 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 SFT2D2O95562 160 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 IFNA6P05013 189 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 IL15RAQ13261 267 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 UNQ6494/PRO21346Q6UXR6 183 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 C1QL2Q7Z5L3 287 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 BEND2Q8NDZ0 799 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 SNIP1Q8TAD8 396 aaKnown RBP14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 CYYR1Q96J86 154 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 LPAR5Q9H1C0 372 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 SMDT1Q9H4I9 107 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 LIPGQ9Y5X9 500 aa14.77□□□□□ -0.04
SHKBP1-205ENST00000594973 A0A0A6YYD4 124 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 A0A1B0GW64 132 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 OR5H1A6NKK0 313 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 ZNF724A8MTY0 619 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 NKX2-8O15522 239 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 PTBP3O95758 552 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 PMP2P02689 132 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 CD46P15529 392 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 THBS4P35443 961 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 CLINT1Q14677 625 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 MIDNQ504T8 468 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 KCNG3Q8TAE7 436 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 REEP6Q96HR9 211 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 NOL4LQ96MY1 436 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 PBDC1Q9BVG4 233 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 TMEM59Q9BXS4 323 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 OR2H1Q9GZK4 316 aa14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 EIF5A2Q9GZV4 153 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-205ENST00000594973 WNT5BQ9H1J7 359 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms