RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 MGLLQ99685 303 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 TMED9Q9BVK6 235 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 HMG20AQ9NP66 347 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 ACOT13Q9NPJ3 140 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 OR14J1Q9UGF5 321 aa10.18□□□□□ -0.78
UPF1-203ENST00000594504 TRAV8-7A0A075B6U6 113 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 A0A1W2PPK0 400 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 A0A1W2PQ09 198 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 BTBD17A6NE02 478 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 GABRPO00591 440 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 PIN1P1O15428 100 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 PAHP00439 452 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 CHRM2P08172 466 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 CPEP16870 476 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 PRKACAP17612 351 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 PSMA1P25786 263 aaKnown RBP10.17□□□□□ -0.78
UPF1-203ENST00000594504 ZNF93P35789 620 aaPredicted RBP10.17□□□□□ -0.78
UPF1-203ENST00000594504 CEBPDP49716 269 aaPredicted RBP10.17□□□□□ -0.78
UPF1-203ENST00000594504 BMXP51813 675 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 UBE2E1P51965 193 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 CAPZA1P52907 286 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 ERVFRD-1P60508 538 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 EMX1Q04741 257 aaPredicted RBP10.17□□□□□ -0.78
UPF1-203ENST00000594504 ZNF146Q15072 292 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 TRAM1Q15629 374 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 LY6EQ16553 131 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 ACSM3Q53FZ2 586 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 SPIN3Q5JUX0 258 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 UNQ9370/PRO34162Q6UXP9 181 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 PPP1R35Q8TAP8 253 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 TNFAIP8L1Q8WVP5 186 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 AJUBAQ96IF1 538 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 FAM234AQ9H0X4 552 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 IL36RNQ9UBH0 155 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 GLS2Q9UI32 602 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 LRRC42Q9Y546 428 aa10.17□□□□□ -0.78
UPF1-203ENST00000594504 MGAM2Q2M2H8 2515 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 TRBV23-1A0A0A0MS06 115 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 A0A0G2JK05 382 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 H3BUX3 64 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 SC5DO75845 299 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 HAND1O96004 215 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 PTGFRP43088 359 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 MTNR1BP49286 362 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 COL10A1Q03692 680 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 INSL4Q14641 139 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 ASCL4Q6XD76 172 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 C1orf122Q6ZSJ8 110 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 CDH26Q8IXH8 852 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 FAM185AQ8N0U4 392 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 SPARTQ8N0X7 666 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 NKAIN3Q8N8D7 197 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 C11orf44Q8N8P7 122 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 ASCC1Q8N9N2 400 aaKnown RBP10.16□□□□□ -0.78
UPF1-203ENST00000594504 SSX3Q99909 188 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 FAM192AQ9GZU8 254 aa10.16□□□□□ -0.78
UPF1-203ENST00000594504 MEGF11A6BM72 1044 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 MAGEA13PA6NCF6 341 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 K7N7A8 449 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 M0R1W7 72 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 SH2D1BO14796 132 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 ZNF737O75373 536 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 TK1P04183 234 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 MAS1P04201 325 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 CSF1P09603 554 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 CALCBP10092 127 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 GABRA5P31644 462 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 OR3A4PP47883 348 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 RPS25P62851 125 aaKnown RBP10.15□□□□□ -0.78
UPF1-203ENST00000594504 RSU1Q15404 277 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 KCTD21Q4G0X4 260 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 UBE2UQ5VVX9 321 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 ELP2Q6IA86 826 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 ZNF773Q6PK81 442 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 CEACAM19Q7Z692 300 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 BEND2Q8NDZ0 799 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 PHYHIPQ92561 330 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 FCGR1BQ92637 280 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 TMEM203Q969S6 136 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 S100A13Q99584 98 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 METTL8Q9H825 291 aaKnown RBP10.15□□□□□ -0.78
UPF1-203ENST00000594504 EXOSC4Q9NPD3 245 aaKnown RBP10.15□□□□□ -0.78
UPF1-203ENST00000594504 C19orf12Q9NSK7 152 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 IL36GQ9NZH8 169 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 FBLN5Q9UBX5 448 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 GSTK1Q9Y2Q3 226 aa10.15□□□□□ -0.78
UPF1-203ENST00000594504 TET2Q6N021 2002 aaPredicted RBP10.15□□□□□ -0.78
UPF1-203ENST00000594504 MEGF8Q7Z7M0 2845 aa10.15□□□□□ -0.79
UPF1-203ENST00000594504 G3V4G9 280 aa10.14□□□□□ -0.79
UPF1-203ENST00000594504 UCHL1P09936 223 aa10.14□□□□□ -0.79
UPF1-203ENST00000594504 DUSP1P28562 367 aa10.14□□□□□ -0.79
UPF1-203ENST00000594504 SNU13P55769 128 aaKnown RBP10.14□□□□□ -0.79
UPF1-203ENST00000594504 RPL31P62899 125 aaKnown RBP10.14□□□□□ -0.79
UPF1-203ENST00000594504 BLMHQ13867 455 aa10.14□□□□□ -0.79
UPF1-203ENST00000594504 HSD17B12Q53GQ0 312 aa10.14□□□□□ -0.79
UPF1-203ENST00000594504 FAM27D1Q5T7N8 215 aa10.14□□□□□ -0.79
UPF1-203ENST00000594504 NCR3LG1Q68D85 454 aa10.14□□□□□ -0.79
UPF1-203ENST00000594504 TMEM91Q6ZNR0 172 aa10.14□□□□□ -0.79
UPF1-203ENST00000594504 OR8H2Q8N162 312 aa10.14□□□□□ -0.79
UPF1-203ENST00000594504 JAGN1Q8N5M9 183 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms