RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 FXYD6Q9H0Q3 95 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 MYOZ1Q9NP98 299 aaPredicted RBP11.22□□□□□ -0.61
VRK3-205ENST00000593919 MTCH1Q9NZJ7 389 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 ARFGEF3Q5TH69 2177 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 DOPEY1Q5JWR5 2465 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 LRP5LA4QPB2 252 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 ARPC5O15511 151 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 NOS1APO75052 506 aaPredicted RBP11.21□□□□□ -0.61
VRK3-205ENST00000593919 CLDN14O95500 239 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 TBPP20226 339 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 BCL3P20749 454 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 AGAP20933 346 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 NFYAP23511 347 aaPredicted RBP11.21□□□□□ -0.61
VRK3-205ENST00000593919 CD34P28906 385 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 BLVRBP30043 206 aaPredicted RBP11.21□□□□□ -0.61
VRK3-205ENST00000593919 ZMYND11Q15326 602 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 MPPED2Q15777 294 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 PNLIPRP3Q17RR3 467 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 PIGYQ3MUY2 71 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 SLC25A42Q86VD7 318 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 TMEM200AQ86VY9 491 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 DMRTC2Q8IXT2 367 aaPredicted RBP11.21□□□□□ -0.61
VRK3-205ENST00000593919 MKXQ8IYA7 352 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 OSR2Q8N2R0 312 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 ZNF808Q8N4W9 903 aaPredicted RBP11.21□□□□□ -0.61
VRK3-205ENST00000593919 ZDHHC22Q8N966 263 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 MRPL24Q96A35 216 aaKnown RBP11.21□□□□□ -0.61
VRK3-205ENST00000593919 TMPRSS13Q9BYE2 586 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 ATP23Q9Y6H3 246 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 FAM208BQ5VWN6 2430 aa11.21□□□□□ -0.61
VRK3-205ENST00000593919 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.21□□□□□ -0.62
VRK3-205ENST00000593919 TMEM210A6NLX4 147 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 FOXI3A8MTJ6 420 aaPredicted RBP11.21□□□□□ -0.62
VRK3-205ENST00000593919 SHISA9B4DS77 424 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 MCRIP1C9JLW8 97 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 F8VVB4 439 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 F8VWA3 439 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 J3QT63 122 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 SIAH2O43255 324 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 RHBDL1O75783 438 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 C1QL1O75973 258 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 CFDP00746 253 aaPredicted RBP11.21□□□□□ -0.62
VRK3-205ENST00000593919 IFNA7P01567 189 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 GABRR1P24046 479 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 SELENOVP59797 346 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 IL24Q13007 206 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 PPP1R1AQ13522 171 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 LIN54Q6MZP7 749 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 LYG2Q86SG7 212 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 FBXL14Q8N1E6 418 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 SCCPDHQ8NBX0 429 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 ADAD2Q8NCV1 583 aaKnown RBP11.21□□□□□ -0.62
VRK3-205ENST00000593919 PCNPQ8WW12 178 aaKnown RBP11.21□□□□□ -0.62
VRK3-205ENST00000593919 MRPS24Q96EL2 167 aaKnown RBP11.21□□□□□ -0.62
VRK3-205ENST00000593919 PECRQ9BY49 303 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 PKIBQ9C010 78 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 ZNF442Q9H7R0 627 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 TAAR3PQ9P1P4 343 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 ANAPC10Q9UM13 185 aa11.21□□□□□ -0.62
VRK3-205ENST00000593919 ZSCAN5BA6NJL1 495 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 TRAPPC2LH3BP13 241 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 CCSO14618 274 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 GRPP07492 148 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 AKR1C4P17516 323 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 AMY2BP19961 511 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 C4BPBP20851 252 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 SEC61A1P61619 476 aaKnown RBP11.2□□□□□ -0.62
VRK3-205ENST00000593919 ADIPOQQ15848 244 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 TAF9Q16594 264 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 LY6G6FQ5SQ64 297 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 Q8NFD4 153 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 OR2Z1Q8NG97 314 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 MARCH1Q8TCQ1 289 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 MAFIPQ8WZ33 124 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 ZNF488Q96MN9 340 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 ST6GALNAC5Q9BVH7 336 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 CXXC4Q9H2H0 198 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 PCDHB16Q9NRJ7 776 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 ZNF581Q9P0T4 197 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 UBQLN2Q9UHD9 624 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 ZNF230Q9UIE0 474 aaPredicted RBP11.2□□□□□ -0.62
VRK3-205ENST00000593919 ST3GAL6Q9Y274 331 aa11.2□□□□□ -0.62
VRK3-205ENST00000593919 CDIPTO14735 213 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 GEMIN2O14893 280 aaKnown RBP11.19□□□□□ -0.62
VRK3-205ENST00000593919 RGS11O94810 467 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 CD3EP07766 207 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 NAT1P18440 290 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 ZBTB25P24278 435 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 RBM11P57052 281 aaKnown RBP11.19□□□□□ -0.62
VRK3-205ENST00000593919 SIGIRRQ6IA17 410 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 ELP2Q6IA86 826 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 DCHS2Q6V1P9 2916 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 SPERTQ8NA61 448 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 OR5H2Q8NGV7 314 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 CASTOR1Q8WTX7 329 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 FBXW5Q969U6 566 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 HS3ST6Q96QI5 342 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 OCSTAMPQ9BR26 566 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 FN3KRPQ9HA64 309 aa11.19□□□□□ -0.62
VRK3-205ENST00000593919 UBR5O95071 2799 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms