RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 RAB40BQ12829 278 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 NSUN5P1Q3KNT7 163 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 PRAMEF5Q5TYX0 476 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 SERPINA12Q8IW75 414 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 PARP16Q8N5Y8 322 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 OR4D6Q8NGJ1 314 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 OR5D14Q8NGL3 314 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 CAPSLQ8WWF8 208 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 RFT1Q96AA3 541 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 NCOR1P1Q9H4R4 102 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 OR6C3Q9NZP0 311 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 MYRFQ9Y2G1 1151 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 GMPPBQ9Y5P6 360 aa10.65□□□□□ -0.7
APOC1-209ENST00000592885 ADARB2-AS1A8MUL3 147 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 SLC33A1O00400 549 aaPredicted RBP10.64□□□□□ -0.71
APOC1-209ENST00000592885 MMP23AO75900 390 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 OR2F2O95006 317 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 HCKP08631 526 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 MTNR1BP49286 362 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 ZP1P60852 638 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 PAX5Q02548 391 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 AESQ08117 197 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 KPNB1Q14974 876 aaKnown RBP10.64□□□□□ -0.71
APOC1-209ENST00000592885 KISS1Q15726 138 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 HLA-DRB5Q30154 266 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 KRBOX4Q5JUW0 171 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 CCDC144NLQ6NUI1 221 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 Q6P435 159 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 CBR4Q8N4T8 237 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 PXT1Q8NFP0 134 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 OR5D18Q8NGL1 313 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 R3HDM4Q96D70 268 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 SPACA5Q96QH8 159 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 CITED2Q99967 270 aaPredicted RBP10.64□□□□□ -0.71
APOC1-209ENST00000592885 OCSTAMPQ9BR26 566 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 C9orf16Q9BUW7 83 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 MMP28Q9H239 520 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 PCDHB16Q9NRJ7 776 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 DHDHQ9UQ10 334 aa10.64□□□□□ -0.71
APOC1-209ENST00000592885 M0QZK8 103 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 TOR1AO14656 332 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 ZFPL1O95159 310 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 CALCBP10092 127 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 JUNBP17275 347 aaPredicted RBP10.63□□□□□ -0.71
APOC1-209ENST00000592885 MNDAP41218 407 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 GLIPR1P48060 266 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 KCNJ3P48549 501 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 PRRX1P54821 245 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 BLCAPP62952 87 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 ZIK1Q3SY52 487 aaPredicted RBP10.63□□□□□ -0.71
APOC1-209ENST00000592885 FBLN7Q53RD9 439 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 TPTE2P1Q5T6R2 138 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 ZNF691Q5VV52 312 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 ELP2Q6IA86 826 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 OR5AK2Q8NH90 309 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 TSEN15Q8WW01 171 aaKnown RBP10.63□□□□□ -0.71
APOC1-209ENST00000592885 COQ2Q96H96 371 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 RBM14Q96PK6 669 aaKnown RBP10.63□□□□□ -0.71
APOC1-209ENST00000592885 ZNF286AQ9HBT8 521 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 ERVK13-1Q9NX77 482 aa10.63□□□□□ -0.71
APOC1-209ENST00000592885 AMMECR1Q9Y4X0 333 aaPredicted RBP10.63□□□□□ -0.71
APOC1-209ENST00000592885 BUB1B-PAK6H3BSN5 160 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 DEGS1O15121 323 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 MAGEB3O15480 346 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 TMEM225BP0DP42 221 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 RAB3AP20336 220 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 GBX2P52951 348 aaPredicted RBP10.62□□□□□ -0.71
APOC1-209ENST00000592885 CD83Q01151 205 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 IL13RA2Q14627 380 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 ATXN7L3Q14CW9 347 aaPredicted RBP10.62□□□□□ -0.71
APOC1-209ENST00000592885 CDK5R1Q15078 307 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 HIST2H2BDQ6DRA6 164 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 ZNF529Q6P280 563 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 LHFPL3Q86UP9 236 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 LYG1Q8N1E2 194 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 OR51T1Q8NGJ9 327 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 OR9G1Q8NH87 305 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 RHOXF1Q8NHV9 184 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 STMN2Q93045 179 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 ZNF649Q9BS31 505 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 SLC25A33Q9BSK2 321 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 JAM3Q9BX67 310 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 ISG20L2Q9H9L3 353 aaKnown RBP10.62□□□□□ -0.71
APOC1-209ENST00000592885 MRPS18AQ9NVS2 196 aaKnown RBP10.62□□□□□ -0.71
APOC1-209ENST00000592885 NECAP2Q9NVZ3 263 aa10.62□□□□□ -0.71
APOC1-209ENST00000592885 RPL36Q9Y3U8 105 aaKnown RBP10.62□□□□□ -0.71
APOC1-209ENST00000592885 KBTBD11-OT1A0A1B0GTJ5 212 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 H0YJX3 145 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 LY6LH3BQJ8 138 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 GDNFP39905 211 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 SCN1BQ07699 218 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 C17orf58Q2M2W7 97 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 TMEM95Q3KNT9 176 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 KLHL22Q53GT1 634 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 BAIAP2L2Q6UXY1 529 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 Q6ZS46 218 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 RNF144BQ7Z419 303 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 ZNF565Q8N9K5 539 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 Q8NFD4 153 aa10.61□□□□□ -0.71
APOC1-209ENST00000592885 OR5AU1Q8NGC0 362 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms