RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 NPBWR1P48145 328 aa11.19□□□□□ -0.62
DNMT1-228ENST00000592705 RAC3P60763 192 aa11.19□□□□□ -0.62
DNMT1-228ENST00000592705 SF3B5Q9BWJ5 86 aaKnown RBP11.19□□□□□ -0.62
DNMT1-228ENST00000592705 CLDN34H7C241 214 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 CYTIPO60759 359 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 SMPD2O60906 423 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 CXCL2P19875 107 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 GNB1P62873 340 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 TMEM65Q6PI78 240 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 OR8U1Q8NH10 309 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 NINQ8N4C6 2090 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 OR10J4P0C629 311 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 VSIG10L2P0DP72 767 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 RAB5AP20339 215 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 ZBTB25P24278 435 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 CEACAM3P40198 252 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 GPR6P46095 362 aaPredicted RBP11.18□□□□□ -0.62
DNMT1-228ENST00000592705 GABRA4P48169 554 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 OR8B3Q8NGG8 313 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 OR8B2Q96RD0 313 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 TRPM6Q9BX84 2022 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 TMEM267Q0VDI3 215 aaPredicted RBP11.18□□□□□ -0.62
DNMT1-228ENST00000592705 FAM209AQ5JX71 171 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 DGAT2L6Q6ZPD8 337 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 FAM24BQ8N5W8 94 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 OR10V1Q8NGI7 309 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 TNFRSF19Q9NS68 423 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 FOXD3Q9UJU5 478 aaPredicted RBP11.18□□□□□ -0.62
DNMT1-228ENST00000592705 AHRRA9YTQ3 701 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 DBX2Q6ZNG2 339 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 MS4A7Q9GZW8 240 aaPredicted RBP11.18□□□□□ -0.62
DNMT1-228ENST00000592705 BARX1Q9HBU1 254 aaPredicted RBP11.18□□□□□ -0.62
DNMT1-228ENST00000592705 VSIG4Q9Y279 399 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 STARD10Q9Y365 291 aa11.18□□□□□ -0.62
DNMT1-228ENST00000592705 RPS4Y1P22090 263 aaKnown RBP11.17□□□□□ -0.62
DNMT1-228ENST00000592705 BRS3P32247 399 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 IL24Q13007 206 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 SMIM15Q7Z3B0 74 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 C9orf40Q8IXQ3 194 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 ADAD2Q8NCV1 583 aaKnown RBP11.17□□□□□ -0.62
DNMT1-228ENST00000592705 ZNF721Q8TF20 911 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 ZNF501Q96CX3 271 aaPredicted RBP11.17□□□□□ -0.62
DNMT1-228ENST00000592705 MRPS18BQ9Y676 258 aaKnown RBP11.17□□□□□ -0.62
DNMT1-228ENST00000592705 INTS1Q8N201 2190 aaKnown RBP11.17□□□□□ -0.62
DNMT1-228ENST00000592705 ZNF320A2RRD8 509 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 MBPP02686 304 aaPredicted RBP11.17□□□□□ -0.62
DNMT1-228ENST00000592705 NGFRP08138 427 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 ATP5J2P56134 94 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 MESP2Q0VG99 397 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 AARDQ4LEZ3 155 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 CHODLQ9H9P2 273 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 KLK13Q9UKR3 277 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 UNC13CQ8NB66 2214 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 NCBP2LA6PVI3 153 aaKnown RBP11.17□□□□□ -0.62
DNMT1-228ENST00000592705 MEOX2P50222 304 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 MLF1P58340 268 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 RPS16P62249 146 aaKnown RBP11.17□□□□□ -0.62
DNMT1-228ENST00000592705 SLC38A11Q08AI6 406 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 ARL16Q0P5N6 197 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 ZP4Q12836 540 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 OVCH2Q7RTZ1 564 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 OR4D10Q8NGI6 311 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 ADAT1Q9BUB4 502 aaKnown RBP11.17□□□□□ -0.62
DNMT1-228ENST00000592705 SLC35D1Q9NTN3 355 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 OR2M5A3KFT3 312 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 ERVH48-1M5A8F1 160 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 HOXA6P31267 233 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 IGFBP7Q16270 282 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 RPEQ96AT9 228 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 ZNF586Q9NXT0 402 aa11.17□□□□□ -0.62
DNMT1-228ENST00000592705 DXOO77932 396 aaKnown RBP11.16□□□□□ -0.62
DNMT1-228ENST00000592705 CST2P09228 141 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 CEACAM6P40199 344 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 ERHP84090 104 aaKnown RBP11.16□□□□□ -0.62
DNMT1-228ENST00000592705 FABP9Q0Z7S8 132 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 MOB3BQ86TA1 216 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.16□□□□□ -0.62
DNMT1-228ENST00000592705 PRR13Q9NZ81 148 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 RBFOX3A6NFN3 312 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 CD200P41217 278 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 SIGLECL1Q8N7X8 197 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 BSCL2Q96G97 398 aaPredicted RBP11.16□□□□□ -0.62
DNMT1-228ENST00000592705 SDHCQ99643 169 aaPredicted RBP11.16□□□□□ -0.62
DNMT1-228ENST00000592705 SAP30LQ9HAJ7 183 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 TMEM8BA6NDV4 472 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 KRASP01116 189 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 NGFP01138 241 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 ADAT3Q96EY9 351 aaPredicted RBP11.16□□□□□ -0.62
DNMT1-228ENST00000592705 HES4Q9HCC6 221 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 PARP11Q9NR21 331 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 MAP1LC3B2A6NCE7 125 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 OR5B21A6NL26 309 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 BPIFB3P59826 476 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 C3AR1Q16581 482 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 CLEC9AQ6UXN8 241 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 HOGA1Q86XE5 327 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 GMPPAQ96IJ6 420 aaPredicted RBP11.16□□□□□ -0.62
DNMT1-228ENST00000592705 COMMD5Q9GZQ3 224 aa11.16□□□□□ -0.62
DNMT1-228ENST00000592705 MAP1LC3BQ9GZQ8 125 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms