RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, human

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCDH-213	ENST00000590627	LMO1	P25800	156 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	TNFSF8	P32971	234 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	PITPNB	P48739	271 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	ZMYND11	Q15326	602 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	KCNJ8	Q15842	424 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	SIGIRR	Q6IA17	410 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	CHST4	Q8NCG5	386 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	RAB1C	Q92928	201 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	MSI2	Q96DH6	328 aa	Known RBP	13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	TIMD4	Q96H15	378 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	DNTTIP1	Q9H147	329 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	SPACA1	Q9HBV2	294 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	DIABLO	Q9NR28	239 aa		13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	RCC2	Q9P258	522 aa	Known RBP	13.83	□□□□□ -0.2
GCDH-213	ENST00000590627	IGHV3OR15-7	A0A075B7D8	119 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	DEGS1	O15121	323 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	XRCC3	O43542	346 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	NDUFA2	O43678	99 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	ZNF205	O95201	554 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	HAND1	O96004	215 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	GLA	P06280	429 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	HNF1A	P20823	631 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	DUSP1	P28562	367 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	PRDX2	P32119	198 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	MDH2	P40926	338 aa	Known RBP	13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	VEGFC	P49767	419 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	TMEM50B	P56557	158 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	MOGAT2	Q3SYC2	334 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	CCDC190	Q86UF4	302 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	MUC20	Q8N307	709 aa	Predicted RBP	13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	CD177	Q8N6Q3	437 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	C19orf18	Q8NEA5	215 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	DEFB108B	Q8NET1	73 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	OR10R2	Q8NGX6	335 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	SDSL	Q96GA7	329 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	HSF4	Q9ULV5	492 aa		13.82	□□□□□ -0.2
GCDH-213	ENST00000590627	TRAV24	A0A0B4J272	114 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	FAM25A	B3EWG3	89 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	FAM25C	B3EWG5	89 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	FAM25G	B3EWG6	89 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	SOCS1	O15524	211 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	PPIH	O43447	177 aa	Known RBP	13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	PDCD6	O75340	191 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	OR7C1	O76099	320 aa	Predicted RBP	13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	OR2H2	O95918	312 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	AMY2B	P19961	511 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	FUT3	P21217	361 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	GABRR1	P24046	479 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	CDK2	P24941	298 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	CHAT	P28329	748 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	BLVRB	P30043	206 aa	Predicted RBP	13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	TALDO1	P37837	337 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	ETV6	P41212	452 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	MNDA	P41218	407 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	SNU13	P55769	128 aa	Known RBP	13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	IKZF1	Q13422	519 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	TMEM155	Q4W5P6	130 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	FAM120AOS	Q5T036	256 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	CNIH2	Q6PI25	160 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	ZNF788	Q6ZQV5	615 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	OR4M1	Q8NGD0	313 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	OR5T2	Q8NGG2	359 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	PHF21A	Q96BD5	680 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	DIRAS2	Q96HU8	199 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	SOST	Q9BQB4	213 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	ZNF581	Q9P0T4	197 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	KAAG1	Q9UBP8	84 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	EXTL2	Q9UBQ6	330 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	RABL2B	Q9UNT1	228 aa		13.81	□□□□□ -0.2
GCDH-213	ENST00000590627	IGHV4-61	A0A0C4DH41	118 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	GPR6	P46095	362 aa	Predicted RBP	13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	ARL6IP1	Q15041	203 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	PLAC9	Q5JTB6	97 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	METAP1D	Q6UB28	335 aa	Predicted RBP	13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	BAIAP2L2	Q6UXY1	529 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	DCDC5	Q6ZRR9	648 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	RAB3C	Q96E17	227 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	NEDD4L	Q96PU5	975 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	TMEM246	Q9BRR3	403 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	C19orf24	Q9BVV8	132 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	BPESC1	Q9GZL8	116 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	ZNF665	Q9H7R5	613 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	OR14J1	Q9UGF5	321 aa		13.8	□□□□□ -0.2
GCDH-213	ENST00000590627	SLC33A1	O00400	549 aa	Predicted RBP	13.79	□□□□□ -0.2
GCDH-213	ENST00000590627	SIGLEC5	O15389	551 aa		13.79	□□□□□ -0.2
GCDH-213	ENST00000590627	ZNF737	O75373	536 aa		13.79	□□□□□ -0.2
GCDH-213	ENST00000590627	GYPA	P02724	150 aa		13.79	□□□□□ -0.2
GCDH-213	ENST00000590627	ZNF44	P15621	663 aa		13.79	□□□□□ -0.2
GCDH-213	ENST00000590627	HIST1H1D	P16402	221 aa	Known RBP	13.79	□□□□□ -0.2
GCDH-213	ENST00000590627	PTBP1	P26599	531 aa	Known RBP eCLIP	13.79	□□□□□ -0.2	3e-11	■■■■□ 23.7
GCDH-213	ENST00000590627	PDCD1	Q15116	288 aa		13.79	□□□□□ -0.2
GCDH-213	ENST00000590627	CARTPT	Q16568	116 aa		13.79	□□□□□ -0.2
GCDH-213	ENST00000590627	TMEM69	Q5SWH9	247 aa		13.79	□□□□□ -0.2
GCDH-213	ENST00000590627		Q6ZTK2	550 aa		13.79	□□□□□ -0.2
GCDH-213	ENST00000590627	ZNF561	Q8N587	486 aa		13.79	□□□□□ -0.2
GCDH-213	ENST00000590627	MED30	Q96HR3	178 aa		13.79	□□□□□ -0.2
GCDH-213	ENST00000590627	ARHGAP5-AS1	Q96IT6	56 aa		13.79	□□□□□ -0.2

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