RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PPP1CAP62136 330 aa13.23□□□□□ -0.29
CIRBP-228ENST00000590347 UNQ5815/PRO19632Q6UWF5 114 aa13.23□□□□□ -0.29
CIRBP-228ENST00000590347 RTL10Q7L3V2 364 aa13.23□□□□□ -0.29
CIRBP-228ENST00000590347 KIR2DL5AQ8N109 375 aa13.23□□□□□ -0.29
CIRBP-228ENST00000590347 ZNF709Q8N972 641 aa13.23□□□□□ -0.29
CIRBP-228ENST00000590347 RLN3Q8WXF3 142 aa13.23□□□□□ -0.29
CIRBP-228ENST00000590347 VPS25Q9BRG1 176 aa13.23□□□□□ -0.29
CIRBP-228ENST00000590347 VAX2Q9UIW0 290 aa13.23□□□□□ -0.29
CIRBP-228ENST00000590347 ZNF407Q9C0G0 2248 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 LRRC3CA6NJW4 275 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 GUSBP08236 651 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 TFF2Q03403 129 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 IZUMO4Q1ZYL8 232 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 FDX2Q6P4F2 183 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 SLC25A26Q70HW3 274 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 LYG1Q8N1E2 194 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 ZNF321PQ8N8H1 164 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 C16orf52Q8NHV5 167 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 PATE1Q8WXA2 126 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 BOD1Q96IK1 185 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 FAM103A1Q9BTL3 118 aaKnown RBP13.22□□□□□ -0.29
CIRBP-228ENST00000590347 SDF2L1Q9HCN8 221 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 PILRAQ9UKJ1 303 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 TRBV24-1A0A075B6N3 115 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 OPN1MWP04001 364 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 OPN1MW2P0DN77 364 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 OPN1MW3P0DN78 364 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 EGR1P18146 543 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 IL12BP29460 328 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 SFTPDP35247 375 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 CST6Q15828 149 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 OR5D14Q8NGL3 314 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 COX14Q96I36 57 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 OR2A5Q96R48 311 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 OR10A2Q9H208 303 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 H0Y8X5 98 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 H7BYZ3 331 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 CYR61O00622 381 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 CT45A8P0DMV1 189 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 CT45A9P0DMV2 189 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 ZNF41P51814 821 aaPredicted RBP13.22□□□□□ -0.29
CIRBP-228ENST00000590347 RND2P52198 227 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 HSF1Q00613 529 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 ZNF117Q03924 483 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 CT45A2Q5DJT8 189 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 LEMD1Q68G75 181 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 WBP2NLQ6ICG8 309 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 NAT6Q93015 286 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 PBOV1Q9GZY1 135 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 ZNF319Q9P2F9 582 aa13.22□□□□□ -0.29
CIRBP-228ENST00000590347 LOC102723971A0A1B0GUV8 181 aa13.21□□□□□ -0.29
CIRBP-228ENST00000590347 CRYM-AS1A6NIL9 109 aa13.21□□□□□ -0.29
CIRBP-228ENST00000590347 HSD11B1P28845 292 aa13.21□□□□□ -0.29
CIRBP-228ENST00000590347 NUFIP2Q7Z417 695 aaKnown RBP13.21□□□□□ -0.29
CIRBP-228ENST00000590347 DNASE2BQ8WZ79 361 aa13.21□□□□□ -0.29
CIRBP-228ENST00000590347 PIGTQ969N2 578 aa13.21□□□□□ -0.29
CIRBP-228ENST00000590347 C1orf147Q96MC9 270 aaPredicted RBP13.21□□□□□ -0.29
CIRBP-228ENST00000590347 CIB3Q96Q77 187 aaPredicted RBP13.21□□□□□ -0.29
CIRBP-228ENST00000590347 RBM24Q9BX46 236 aaKnown RBP13.21□□□□□ -0.29
CIRBP-228ENST00000590347 TBC1D29Q9UFV1 150 aa13.21□□□□□ -0.29
CIRBP-228ENST00000590347 PROB1E7EW31 1015 aa13.21□□□□□ -0.3
CIRBP-228ENST00000590347 NDUFB8O95169 186 aa13.21□□□□□ -0.3
CIRBP-228ENST00000590347 TMEM50AO95807 157 aa13.21□□□□□ -0.3
CIRBP-228ENST00000590347 APODP05090 189 aa13.21□□□□□ -0.3
CIRBP-228ENST00000590347 TMEM267Q0VDI3 215 aaPredicted RBP13.21□□□□□ -0.3
CIRBP-228ENST00000590347 ZNF787Q6DD87 383 aa13.21□□□□□ -0.3
CIRBP-228ENST00000590347 FAM3CQ92520 227 aa13.21□□□□□ -0.3
CIRBP-228ENST00000590347 POLR1DQ9Y2S0 133 aa13.21□□□□□ -0.3
CIRBP-228ENST00000590347 MTCH2Q9Y6C9 303 aa13.21□□□□□ -0.3
CIRBP-228ENST00000590347 ZNF320A2RRD8 509 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 ROM1Q03395 351 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 GATAD1Q8WUU5 269 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 THRSPQ92748 146 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 PTX4Q96A99 478 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 RBKSQ9H477 322 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 PRSS47A8MTI9 375 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 ANGPTL7O43827 346 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 LILRA1O75019 489 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 PFN1P07737 140 aaKnown RBP13.2□□□□□ -0.3
CIRBP-228ENST00000590347 DEFA4P12838 97 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 OR10J1P30954 320 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 CDAP32320 146 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 RPL27P61353 136 aaKnown RBP13.2□□□□□ -0.3
CIRBP-228ENST00000590347 TMEM187Q14656 261 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 OR5AS1Q8N127 324 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 VSTM2LQ96N03 204 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 OR5B12Q96R08 314 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 IMMP2LQ96T52 175 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 RPRMQ9NS64 109 aa13.2□□□□□ -0.3
CIRBP-228ENST00000590347 FOXS1O43638 330 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 OR5G3P0C626 314 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 HINT1P49773 126 aaPredicted RBP13.19□□□□□ -0.3
CIRBP-228ENST00000590347 KCNG3Q8TAE7 436 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 PECRQ9BY49 303 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 GPR84Q9NQS5 396 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 ZFP30Q9Y2G7 519 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 CEACAM18A8MTB9 384 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 SRSF10O75494 262 aaKnown RBP13.19□□□□□ -0.3
CIRBP-228ENST00000590347 ZNF728P0DKX0 622 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms