RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 RCC1P18754 421 aaPredicted RBP12.65□□□□□ -0.38
RETREG3-208ENST00000589797 CEBPDP49716 269 aaPredicted RBP12.65□□□□□ -0.38
RETREG3-208ENST00000589797 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 PRAMEF6Q5VXH4 476 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 OR13G1Q8NGZ3 307 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 NARFLQ9H6Q4 476 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 SLC2A9Q9NRM0 540 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 GLAP06280 429 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 TMEM50BP56557 158 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 SVBPQ8N300 66 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 DECR2Q9NUI1 292 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 LEUTXA8MZ59 168 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 SCTP09683 121 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 FDX2Q6P4F2 183 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 GAPTQ8N292 157 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 WNT2BQ93097 391 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 HEXAP06865 529 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 MSMO1Q15800 293 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 IZUMO4Q1ZYL8 232 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 FAM185AQ8N0U4 392 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 SPTBN4Q9H254 2564 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 RGS13O14921 159 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 RRP8O43159 456 aaKnown RBP12.64□□□□□ -0.39
RETREG3-208ENST00000589797 ACP1P24666 158 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 BAXQ07812 192 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 CST9LP1Q5W188 147 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 BTNL3Q6UXE8 466 aa12.64□□□□□ -0.39
RETREG3-208ENST00000589797 IGKV1-9A0A0C4DH69 117 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 A0A0U1RQV5 110 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 OPN1MWP04001 364 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 OPN1MW2P0DN77 364 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 OPN1MW3P0DN78 364 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 TMEM33P57088 247 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 PLGLAQ15195 96 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 CLEC12BQ2HXU8 276 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 SOHLH1Q5JUK2 328 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 CALHM1Q8IU99 346 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 MITD1Q8WV92 249 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 OPN3Q9H1Y3 402 aaPredicted RBP12.63□□□□□ -0.39
RETREG3-208ENST00000589797 FBXL17Q9UF56 701 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 LIPGQ9Y5X9 500 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 GPR31O00270 319 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 PPYP01298 95 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 FAM3AP98173 230 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 H2BFWTQ7Z2G1 175 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 LINC00052Q96N35 136 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 C3orf85A0A1B0GTC6 90 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 E5RGE8 158 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 TERTO14746 1132 aaKnown RBP12.63□□□□□ -0.39
RETREG3-208ENST00000589797 JTBO76095 146 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 ECI1P42126 302 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 Q0VFX4 171 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 PEA15Q15121 130 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 IL36RNQ9UBH0 155 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 PSG11Q9UQ72 335 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 NSG2Q9Y328 171 aa12.63□□□□□ -0.39
RETREG3-208ENST00000589797 OBSL1O75147 1896 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 MPTX1A8MV57 137 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 EIF3GO75821 320 aaKnown RBP eCLIP12.62□□□□□ -0.39
RETREG3-208ENST00000589797 ERVS71-1P61550 626 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 CLPPQ16740 277 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-208ENST00000589797 PDLIM3Q53GG5 364 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-208ENST00000589797 PRAMEF5Q5TYX0 476 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 LAMTOR1Q6IAA8 161 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 ZNF610Q8N9Z0 462 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 LRRC29Q8WV35 223 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 GALMQ96C23 342 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 ZNF552Q9H707 407 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-208ENST00000589797 NAA60Q9H7X0 242 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 OR5AC2Q9NZP5 309 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 NCOA6Q14686 2063 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-208ENST00000589797 NTN3O00634 580 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-208ENST00000589797 CTXN2P0C2S0 81 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 PTGDSP41222 190 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 SRPXP78539 464 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 AESQ08117 197 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 ADAM5Q6NVV9 412 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 FADS6Q8N9I5 356 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 C2CD4CQ8TF44 421 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 CCL17Q92583 94 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 PURGQ9UJV8 347 aaKnown RBP12.62□□□□□ -0.39
RETREG3-208ENST00000589797 A0A1W2PPV4 95 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 SNCAP37840 140 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 TMEM267Q0VDI3 215 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-208ENST00000589797 TBC1D26Q86UD7 250 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 OR4A16Q8NH70 328 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 AQP3Q92482 292 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 RAB18Q9NP72 206 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 DOCK11Q5JSL3 2073 aa12.62□□□□□ -0.39
RETREG3-208ENST00000589797 ZNF891A8MT65 544 aaPredicted RBP12.61□□□□□ -0.39
RETREG3-208ENST00000589797 TMEM14DPA8MWL7 114 aa12.61□□□□□ -0.39
RETREG3-208ENST00000589797 E9PQ18 207 aa12.61□□□□□ -0.39
RETREG3-208ENST00000589797 ACTL6AO96019 429 aa12.61□□□□□ -0.39
RETREG3-208ENST00000589797 METTL15P1P0C7V9 234 aa12.61□□□□□ -0.39
RETREG3-208ENST00000589797 HOGA1Q86XE5 327 aa12.61□□□□□ -0.39
RETREG3-208ENST00000589797 WDFY1Q8IWB7 410 aa12.61□□□□□ -0.39
RETREG3-208ENST00000589797 CPEB3Q8NE35 698 aaKnown RBP12.61□□□□□ -0.39
RETREG3-208ENST00000589797 DDA1Q9BW61 102 aa12.61□□□□□ -0.39
RETREG3-208ENST00000589797 PIGMQ9H3S5 423 aa12.61□□□□□ -0.39
RETREG3-208ENST00000589797 SLC39A9Q9NUM3 307 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms