RNA–Protein interactions for RNA: ENST00000589146.5

CAPNS1-207, Transcript of calpain small subunit 1, humanhuman

TSL 3 BASIC

Gene CAPNS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-207ENST00000589146 TNFSF4P23510 183 aa19.21■□□□□ 0.67
CAPNS1-207ENST00000589146 SCGB2B2Q4G0G5 96 aa19.21■□□□□ 0.67
CAPNS1-207ENST00000589146 ATPAF1Q5TC12 328 aaPredicted RBP19.21■□□□□ 0.67
CAPNS1-207ENST00000589146 CD276Q5ZPR3 534 aa19.21■□□□□ 0.67
CAPNS1-207ENST00000589146 GAPTQ8N292 157 aa19.21■□□□□ 0.67
CAPNS1-207ENST00000589146 GPN1Q9HCN4 374 aaPredicted RBP19.21■□□□□ 0.67
CAPNS1-207ENST00000589146 Q9N2K0 584 aa19.21■□□□□ 0.67
CAPNS1-207ENST00000589146 TMEM82A0PJX8 343 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 TUBAL3A6NHL2 446 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 OR2AT4A6NND4 320 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 SRRM5B3KS81 715 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 C3orf80F5H4A9 247 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 IFNL4K9M1U5 179 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 HAND1O96004 215 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 ZNF44P15621 663 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 GLRA1P23415 457 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 SERPINF1P36955 418 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 CD300CQ08708 224 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 EFNB3Q15768 340 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 SMIM21Q3B7S5 101 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 ZNF880Q6PDB4 577 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 Q8TCH9 128 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 LRRC29Q8WV35 223 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 CCDC107Q8WV48 283 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 ITLN1Q8WWA0 313 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 ST6GAL2Q96JF0 529 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 ETAA1Q9NY74 926 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 EHFQ9NZC4 300 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 ZNF221Q9UK13 617 aa19.2■□□□□ 0.66
CAPNS1-207ENST00000589146 WNT9BO14905 357 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 LHBP01229 141 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 HPXP02790 462 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 RLN1P04808 185 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 LOXP28300 417 aaPredicted RBP19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 UQCRFS1P47985 274 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 ARPC4P59998 168 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 TNFAIP6P98066 277 aaPredicted RBP19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 TLE1Q04724 770 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 SPRNQ5BIV9 151 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 MRPL30Q8TCC3 161 aaKnown RBP19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 ITLN2Q8WWU7 325 aaPredicted RBP19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 RDH5Q92781 318 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 TMEM204Q9BSN7 226 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 MED28Q9H204 178 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 NECAP2Q9NVZ3 263 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 VSIG4Q9Y279 399 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 RNF115Q9Y4L5 304 aa19.19■□□□□ 0.66
CAPNS1-207ENST00000589146 COL6A6A6NMZ7 2263 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 hCG_1807616A0A1W2PRN6 198 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 FAM221AA4D161 298 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 C17orf100A8MU93 164 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 BOLA2-SMG1P6H3BVE0 249 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 H7C1Q1 480 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 HS3ST1O14792 307 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 CLDN14O95500 239 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 APOBEC3AP31941 199 aaPredicted RBP19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 TSPAN5P62079 268 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 PAN3Q58A45 887 aaKnown RBP19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 ZNF626Q68DY1 528 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 ZNF660Q6AZW8 331 aaPredicted RBP19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 DHRS11Q6UWP2 260 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 NEK7Q8TDX7 302 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 SCGB3A2Q96PL1 93 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 BEX2Q9BXY8 128 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 WDR13Q9H1Z4 485 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 BEX1Q9HBH7 125 aa19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 CHMP1AQ9HD42 196 aaPredicted RBP19.18■□□□□ 0.66
CAPNS1-207ENST00000589146 HCFC1P51610 2035 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 DEFB108AA8MXU0 73 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 SIAH2O43255 324 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 ECI1P42126 302 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 SNTB1Q13884 538 aaKnown RBP19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 SURF2Q15527 256 aaPredicted RBP19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 AADACL3Q5VUY0 350 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 FAHD2BQ6P2I3 314 aaPredicted RBP19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 PEG10Q86TG7 708 aaKnown RBP19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 SLC25A42Q86VD7 318 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 MOGAT3Q86VF5 341 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 FAHD2AQ96GK7 314 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 SEC22CQ9BRL7 303 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 DECR2Q9NUI1 292 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 GPR132Q9UNW8 380 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 PLCE1Q9P212 2302 aa19.17■□□□□ 0.66
CAPNS1-207ENST00000589146 SIRPB1O00241 398 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 SDCBPO00560 298 aaPredicted RBP19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 SULT1A3P0DMM9 295 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 SULT1A4P0DMN0 295 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 OR5H8P0DN80 308 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 EGR1P18146 543 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 FPR2P25090 351 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 KCNJ3P48549 501 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 CBX3Q13185 183 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 FCN2Q15485 313 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 TESK1Q15569 626 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 FAM209AQ5JX71 171 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 ZNF497Q6ZNH5 498 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 GCSAMQ8N6F7 178 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 DHRS9Q9BPW9 319 aa19.16■□□□□ 0.66
CAPNS1-207ENST00000589146 TMEM165Q9HC07 324 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms