RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 OR6C3Q9NZP0 311 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 POMPQ9Y244 141 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 GSTK1Q9Y2Q3 226 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 KIAA2026Q5HYC2 2103 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 RYR3Q15413 4870 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 ODAMA1E959 279 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 G3V2T6 193 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 H3BSH0 61 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 M0R129 80 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 SIRPB1O00241 398 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 KDM4BO94953 1096 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 MT-ND2P03891 347 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 NHLRC4P0CG21 123 aaPredicted RBP11.1□□□□□ -0.63
VMP1-209ENST00000588915 MYCNOSP40205 109 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 GLIPR1P48060 266 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 POU3F4P49335 361 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 GP2P55259 537 aaKnown RBP11.1□□□□□ -0.63
VMP1-209ENST00000588915 RPL23AP62750 156 aaKnown RBP11.1□□□□□ -0.63
VMP1-209ENST00000588915 AESQ08117 197 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 C9orf152Q5JTZ5 239 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 UNQ9370/PRO34162Q6UXP9 181 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 BAIAP2L2Q6UXY1 529 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 FAM220AQ7Z4H9 259 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 SAXO1Q8IYX7 474 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 OR9G1Q8NH87 305 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 CHPT1Q8WUD6 406 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 RFKQ969G6 155 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 ADAT3Q96EY9 351 aaPredicted RBP11.1□□□□□ -0.63
VMP1-209ENST00000588915 OPALINQ96PE5 141 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 NCOR1P1Q9H4R4 102 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 NEK6Q9HC98 313 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 MOB4Q9Y3A3 225 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 HSPE1-MOB4S4R3N1 261 aa11.1□□□□□ -0.63
VMP1-209ENST00000588915 GYG2O15488 501 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 FGF16O43320 207 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 MITFO75030 526 aaPredicted RBP11.09□□□□□ -0.63
VMP1-209ENST00000588915 HOXD3P31249 432 aaPredicted RBP11.09□□□□□ -0.63
VMP1-209ENST00000588915 ATP6V1E1P36543 226 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 GDNFP39905 211 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 KIR3DL2P43630 455 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 C17orf58Q2M2W7 97 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 KRBOX4Q5JUW0 171 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 FDX2Q6P4F2 183 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 ETV3LQ6ZN32 361 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 ZDHHC13Q8IUH4 622 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 ZNF565Q8N9K5 539 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 OR10H4Q8NGA5 316 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 OR8J1Q8NGP2 316 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 OR2G2Q8NGZ5 317 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 BCAS4Q8TDM0 211 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 FGGYQ96C11 551 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 MBOAT4Q96T53 435 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 GABARAPL1Q9H0R8 117 aa11.09□□□□□ -0.63
VMP1-209ENST00000588915 AMMECR1Q9Y4X0 333 aaPredicted RBP11.09□□□□□ -0.63
VMP1-209ENST00000588915 KBTBD11-OT1A0A1B0GTJ5 212 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 RAMP3O60896 148 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 RPSAP08865 295 aaKnown RBP11.08□□□□□ -0.64
VMP1-209ENST00000588915 OCM2P0CE71 109 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 OCMP0CE72 109 aaPredicted RBP11.08□□□□□ -0.64
VMP1-209ENST00000588915 CGB3P0DN86 165 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 CGB7P0DN87 165 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 VSIG8P0DPA2 414 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 ZNF44P15621 663 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 ZNF20P17024 532 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 OR3A4PP47883 348 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 CCR9P51686 369 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 SNU13P55769 128 aaKnown RBP11.08□□□□□ -0.64
VMP1-209ENST00000588915 ATP6AP1Q15904 470 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 Q6P435 159 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 SLC16A12Q6ZSM3 486 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 RDH10Q8IZV5 341 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.64
VMP1-209ENST00000588915 RPEQ96AT9 228 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 COQ2Q96H96 371 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 P2RX4Q99571 388 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 ZNF649Q9BS31 505 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 LINC00574Q9H8X3 128 aa11.08□□□□□ -0.64
VMP1-209ENST00000588915 IGKV1-12A0A0C4DH73 117 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 SH2D7A6NKC9 451 aaPredicted RBP11.07□□□□□ -0.64
VMP1-209ENST00000588915 SLC33A1O00400 549 aaPredicted RBP11.07□□□□□ -0.64
VMP1-209ENST00000588915 DEGS1O15121 323 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 IGKV1D-12P01611 117 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 CALCBP10092 127 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 DBTP11182 482 aaKnown RBP11.07□□□□□ -0.64
VMP1-209ENST00000588915 SLC35B1P78383 322 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 OR2W3Q7Z3T1 314 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 ZNF329Q86UD4 541 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 OR8H3Q8N146 312 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 HAVCR2Q8TDQ0 301 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 KIRREL1Q96J84 757 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 FRRS1LQ9P0K9 344 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 GNG8Q9UK08 70 aa11.07□□□□□ -0.64
VMP1-209ENST00000588915 FAM172BPA6NC97 362 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 H0YHG0 523 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 J3QR06 171 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 IGHG2P01859 326 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 SNRNP70P08621 437 aaKnown RBP11.06□□□□□ -0.64
VMP1-209ENST00000588915 FASP25445 335 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 C21orf33P30042 268 aaPredicted RBP11.06□□□□□ -0.64
VMP1-209ENST00000588915 RAB7AP51149 207 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms