RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 DTX2Q86UW9 622 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 C1orf87Q8N0U7 546 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 CENPSQ8N2Z9 138 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 GVQW1Q8N7I0 195 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 TMEM229BQ8NBD8 167 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 DEDD2Q8WXF8 326 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 ST6GALNAC5Q9BVH7 336 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 RAB1BQ9H0U4 201 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 WIPI2Q9Y4P8 454 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 RAI1Q7Z5J4 1906 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-209ENST00000588857 ZNF736B4DX44 427 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-209ENST00000588857 IFNL4K9M1U5 179 aa18.7■□□□□ 0.58
ATG4D-209ENST00000588857 OXA1LQ15070 435 aa18.7■□□□□ 0.58
ATG4D-209ENST00000588857 C11orf71Q6IPW1 123 aa18.7■□□□□ 0.58
ATG4D-209ENST00000588857 GDPD3Q7L5L3 318 aa18.7■□□□□ 0.58
ATG4D-209ENST00000588857 NRARPQ7Z6K4 114 aa18.7■□□□□ 0.58
ATG4D-209ENST00000588857 BPIFB2Q8N4F0 458 aa18.7■□□□□ 0.58
ATG4D-209ENST00000588857 OR5T2Q8NGG2 359 aa18.7■□□□□ 0.58
ATG4D-209ENST00000588857 DYRK2Q92630 601 aa18.7■□□□□ 0.58
ATG4D-209ENST00000588857 HDHD3Q9BSH5 251 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-209ENST00000588857 C12orf4Q9NQ89 552 aa18.7■□□□□ 0.58
ATG4D-209ENST00000588857 ZNF701Q9NV72 531 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-209ENST00000588857 LAMP3Q9UQV4 416 aa18.7■□□□□ 0.58
ATG4D-209ENST00000588857 IGHV1-69-2A0A0G2JMI3 117 aa18.69■□□□□ 0.58
ATG4D-209ENST00000588857 OR2AT4A6NND4 320 aa18.69■□□□□ 0.58
ATG4D-209ENST00000588857 SLC33A1O00400 549 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-209ENST00000588857 HPXP02790 462 aa18.69■□□□□ 0.58
ATG4D-209ENST00000588857 MT-ND4P03905 459 aa18.69■□□□□ 0.58
ATG4D-209ENST00000588857 AKAIN1P0CW23 69 aa18.69■□□□□ 0.58
ATG4D-209ENST00000588857 CD80P33681 288 aa18.69■□□□□ 0.58
ATG4D-209ENST00000588857 CEBPDP49716 269 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-209ENST00000588857 ENKURQ8TC29 256 aa18.69■□□□□ 0.58
ATG4D-209ENST00000588857 CCL17Q92583 94 aa18.69■□□□□ 0.58
ATG4D-209ENST00000588857 TRAF4Q9BUZ4 470 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-209ENST00000588857 CHMP1AQ9HD42 196 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-209ENST00000588857 HRASLSQ9HDD0 168 aa18.69■□□□□ 0.58
ATG4D-209ENST00000588857 DSCAMO60469 2012 aa18.69■□□□□ 0.58
ATG4D-209ENST00000588857 IGHV3OR15-7A0A075B7D8 119 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 NAP1L6A6NFF2 107 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 CD3DP04234 171 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 PSG2P11465 335 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 DTYMKP23919 212 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 HLA-DMAP28067 261 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 PRDX2P32119 198 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 RFX2P48378 723 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 MICBQ29980 383 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 SFRP4Q6FHJ7 346 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-209ENST00000588857 STEAP1BQ6NZ63 245 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 HOGA1Q86XE5 327 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 TGIF2LYQ8IUE0 185 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 OR4S1Q8NGB4 309 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 CHST6Q9GZX3 395 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 TMEM106BQ9NUM4 274 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 MCUBQ9NWR8 336 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 ETAA1Q9NY74 926 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 ZNF230Q9UIE0 474 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-209ENST00000588857 ANAPC10Q9UM13 185 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 FAM240BA0A1B0GVZ2 78 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 FAM221AA4D161 298 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 LMO1P25800 156 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 MDH2P40926 338 aaKnown RBP18.68■□□□□ 0.58
ATG4D-209ENST00000588857 HFEQ30201 348 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 FAM201AQ5SY85 155 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 OR52W1Q6IF63 320 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 CACNG6Q9BXT2 260 aa18.68■□□□□ 0.58
ATG4D-209ENST00000588857 DCHS2Q6V1P9 2916 aa18.67■□□□□ 0.58
ATG4D-209ENST00000588857 SSX4O60224 188 aa18.67■□□□□ 0.58
ATG4D-209ENST00000588857 FCGR3AP08637 254 aa18.67■□□□□ 0.58
ATG4D-209ENST00000588857 MUC1P15941 1255 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-209ENST00000588857 NAT1P18440 290 aa18.67■□□□□ 0.58
ATG4D-209ENST00000588857 AMY2BP19961 511 aa18.67■□□□□ 0.58
ATG4D-209ENST00000588857 GABRA2P47869 451 aa18.67■□□□□ 0.58
ATG4D-209ENST00000588857 COL10A1Q03692 680 aa18.67■□□□□ 0.58
ATG4D-209ENST00000588857 TLE4Q04727 773 aa18.67■□□□□ 0.58
ATG4D-209ENST00000588857 CD177Q8N6Q3 437 aa18.67■□□□□ 0.58
ATG4D-209ENST00000588857 BEST4Q8NFU0 473 aa18.67■□□□□ 0.58
ATG4D-209ENST00000588857 RIMS4Q9H426 269 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-209ENST00000588857 SEBOXQ9HB31 216 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-209ENST00000588857 EDARQ9UNE0 448 aa18.67■□□□□ 0.58
ATG4D-209ENST00000588857 IGKV1D-17A0A075B6S4 117 aa18.66■□□□□ 0.58
ATG4D-209ENST00000588857 OOEPA6NGQ2 149 aa18.66■□□□□ 0.58
ATG4D-209ENST00000588857 TMEM178BH3BS89 294 aa18.66■□□□□ 0.58
ATG4D-209ENST00000588857 ZNF205O95201 554 aa18.66■□□□□ 0.58
ATG4D-209ENST00000588857 RAB3DO95716 219 aa18.66■□□□□ 0.58
ATG4D-209ENST00000588857 TBPP20226 339 aa18.66■□□□□ 0.58
ATG4D-209ENST00000588857 CCBE1Q6UXH8 406 aaPredicted RBP18.66■□□□□ 0.58
ATG4D-209ENST00000588857 OR4C16Q8NGL9 310 aa18.66■□□□□ 0.58
ATG4D-209ENST00000588857 OR4K15Q8NH41 348 aa18.66■□□□□ 0.58
ATG4D-209ENST00000588857 PPA2Q9H2U2 334 aa18.66■□□□□ 0.58
ATG4D-209ENST00000588857 CLEC4MQ9H2X3 399 aaPredicted RBP18.66■□□□□ 0.58
ATG4D-209ENST00000588857 DCAF16Q9NXF7 216 aa18.66■□□□□ 0.58
ATG4D-209ENST00000588857 H7C1Q1 480 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 CD74P04233 296 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 SPNP16150 400 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 MEF2DQ14814 521 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 ACTBL2Q562R1 376 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 RNASE10Q5GAN6 216 aaKnown RBP18.65■□□□□ 0.58
ATG4D-209ENST00000588857 SHEQ5VZ18 495 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 FAAP20Q6NZ36 180 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 ZNF295-AS1Q8N0V1 137 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms