RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 E9PQ18 207 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 SERPINA3P01011 423 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 CGB3P0DN86 165 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 CGB7P0DN87 165 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 ATF1P18846 271 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 PTGFRP43088 359 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 ARHGDIBP52566 201 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 MTCP1P56278 107 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 Q6P435 159 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 LHFPL2Q6ZUX7 228 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 OR2W3Q7Z3T1 314 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 ZNF329Q86UD4 541 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 CCDC197Q8NCU1 140 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 STMN2Q93045 179 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 RFT1Q96AA3 541 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 SPSB1Q96BD6 273 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 KIRREL1Q96J84 757 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 MBOAT4Q96T53 435 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 P2RX4Q99571 388 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 GPR61Q9BZJ8 451 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 A0A1W2PPI3 338 aa14.56□□□□□ -0.08
CCDC43-204ENST00000588687 SLC33A1O00400 549 aaPredicted RBP14.56□□□□□ -0.08
CCDC43-204ENST00000588687 FAM107AO95990 144 aa14.56□□□□□ -0.08
CCDC43-204ENST00000588687 CEACAM3P40198 252 aa14.56□□□□□ -0.08
CCDC43-204ENST00000588687 OR3A4PP47883 348 aa14.56□□□□□ -0.08
CCDC43-204ENST00000588687 NANOS3P60323 173 aaKnown RBP14.56□□□□□ -0.08
CCDC43-204ENST00000588687 C5orf56Q8N8D9 126 aa14.56□□□□□ -0.08
CCDC43-204ENST00000588687 OR10H4Q8NGA5 316 aa14.56□□□□□ -0.08
CCDC43-204ENST00000588687 OR2G2Q8NGZ5 317 aa14.56□□□□□ -0.08
CCDC43-204ENST00000588687 CREB3L1Q96BA8 519 aa14.56□□□□□ -0.08
CCDC43-204ENST00000588687 NOL4LQ96MY1 436 aaPredicted RBP14.56□□□□□ -0.08
CCDC43-204ENST00000588687 OPALINQ96PE5 141 aa14.56□□□□□ -0.08
CCDC43-204ENST00000588687 PPIL3Q9H2H8 161 aaKnown RBP14.56□□□□□ -0.08
CCDC43-204ENST00000588687 SH2D1BO14796 132 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 CYB5AP00167 134 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 ISG15P05161 165 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 CCDC159P0C7I6 412 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 PRKACBP22694 351 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 POLR2IP36954 125 aaKnown RBP14.55□□□□□ -0.08
CCDC43-204ENST00000588687 CDK5R1Q15078 307 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 ATP6AP1Q15904 470 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 TP53I3Q53FA7 332 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 C9orf152Q5JTZ5 239 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 CCDC144NLQ6NUI1 221 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 C8orf86Q6ZUL3 223 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 THNSL2Q86YJ6 484 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 OR51A4Q8NGJ6 313 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 OR10AC1Q8NH08 325 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 SLC7A6OSQ96CW6 309 aaPredicted RBP14.55□□□□□ -0.08
CCDC43-204ENST00000588687 ZNF649Q9BS31 505 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 ADI1Q9BV57 179 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 FRRS1LQ9P0K9 344 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 GLS2Q9UI32 602 aa14.55□□□□□ -0.08
CCDC43-204ENST00000588687 ZNF729A6NN14 1252 aaPredicted RBP14.54□□□□□ -0.08
CCDC43-204ENST00000588687 H0YHG0 523 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 MT-ND2P03891 347 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 SNRNP70P08621 437 aaKnown RBP14.54□□□□□ -0.08
CCDC43-204ENST00000588687 DIAPH2-AS1Q14236 149 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 ATXN7L3Q14CW9 347 aaPredicted RBP14.54□□□□□ -0.08
CCDC43-204ENST00000588687 DNAL1Q4LDG9 190 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 FDX2Q6P4F2 183 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 OR51D1Q8NGF3 324 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 OR5D18Q8NGL1 313 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 OR56B4Q8NH76 319 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 DPF1Q92782 380 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 FGGYQ96C11 551 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 SPACA5Q96QH8 159 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 CIB1Q99828 191 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 LINC00574Q9H8X3 128 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 GNG8Q9UK08 70 aa14.54□□□□□ -0.08
CCDC43-204ENST00000588687 KBTBD11-OT1A0A1B0GTJ5 212 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 FUOMA2VDF0 154 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 J3QRE1 110 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 TOR1AO14656 332 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 SLC6A1P30531 599 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 MNDAP41218 407 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 ZP1P60852 638 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 RBM39Q14498 530 aaKnown RBP14.53□□□□□ -0.08
CCDC43-204ENST00000588687 KPNB1Q14974 876 aaKnown RBP14.53□□□□□ -0.08
CCDC43-204ENST00000588687 KRBOX4Q5JUW0 171 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 TMEM244Q5VVB8 128 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 SAXO1Q8IYX7 474 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 CHST4Q8NCG5 386 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 OR4D6Q8NGJ1 314 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 OR9G1Q8NH87 305 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 TOMM40LQ969M1 308 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 EME1Q96AY2 570 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 GABARAPL3Q9BY60 117 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 RHOFQ9HBH0 211 aa14.53□□□□□ -0.08
CCDC43-204ENST00000588687 G3V2T6 193 aa14.52□□□□□ -0.09
CCDC43-204ENST00000588687 FAM106CPP0CH98 169 aa14.52□□□□□ -0.09
CCDC43-204ENST00000588687 ZNF44P15621 663 aa14.52□□□□□ -0.09
CCDC43-204ENST00000588687 PRRX1P54821 245 aa14.52□□□□□ -0.09
CCDC43-204ENST00000588687 TMED1Q13445 227 aa14.52□□□□□ -0.09
CCDC43-204ENST00000588687 NKAPLQ5M9Q1 402 aa14.52□□□□□ -0.09
CCDC43-204ENST00000588687 FAM220AQ7Z4H9 259 aa14.52□□□□□ -0.09
CCDC43-204ENST00000588687 OR51T1Q8NGJ9 327 aa14.52□□□□□ -0.09
CCDC43-204ENST00000588687 OR13C9Q8NGT0 318 aa14.52□□□□□ -0.09
CCDC43-204ENST00000588687 CHPT1Q8WUD6 406 aa14.52□□□□□ -0.09
CCDC43-204ENST00000588687 MCRIP2Q9BUT9 160 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms