RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SS18L1O75177 396 aaPredicted RBP12.58□□□□□ -0.39
CCDC43-203ENST00000588210 TNFSF13O75888 250 aa12.58□□□□□ -0.39
CCDC43-203ENST00000588210 CTSDP07339 412 aaPredicted RBP12.58□□□□□ -0.39
CCDC43-203ENST00000588210 KIR2DL2P43627 348 aaPredicted RBP12.58□□□□□ -0.39
CCDC43-203ENST00000588210 BLOC1S1P78537 153 aa12.58□□□□□ -0.39
CCDC43-203ENST00000588210 DMRTC1Q5HYR2 192 aa12.58□□□□□ -0.39
CCDC43-203ENST00000588210 OR10Z1Q8NGY1 313 aa12.58□□□□□ -0.39
CCDC43-203ENST00000588210 ABHD3Q8WU67 409 aa12.58□□□□□ -0.39
CCDC43-203ENST00000588210 PIGTQ969N2 578 aa12.58□□□□□ -0.39
CCDC43-203ENST00000588210 ZNF799Q96GE5 643 aa12.58□□□□□ -0.39
CCDC43-203ENST00000588210 Q96M66 194 aa12.58□□□□□ -0.39
CCDC43-203ENST00000588210 NAA11Q9BSU3 229 aaPredicted RBP12.58□□□□□ -0.39
CCDC43-203ENST00000588210 SEC11CQ9BY50 192 aa12.58□□□□□ -0.39
CCDC43-203ENST00000588210 FOXD3Q9UJU5 478 aaPredicted RBP12.58□□□□□ -0.39
CCDC43-203ENST00000588210 IGKV1D-8A0A087WSZ0 117 aa12.58□□□□□ -0.4
CCDC43-203ENST00000588210 FAM90A27PA6NNH2 459 aa12.58□□□□□ -0.4
CCDC43-203ENST00000588210 DHRS7CA6NNS2 312 aa12.58□□□□□ -0.4
CCDC43-203ENST00000588210 CLDN1O95832 211 aa12.58□□□□□ -0.4
CCDC43-203ENST00000588210 HOXB5P09067 269 aa12.58□□□□□ -0.4
CCDC43-203ENST00000588210 RBMXP38159 391 aaKnown RBP12.58□□□□□ -0.4
CCDC43-203ENST00000588210 S100A10P60903 97 aa12.58□□□□□ -0.4
CCDC43-203ENST00000588210 SRSF3P84103 164 aaKnown RBP12.58□□□□□ -0.4
CCDC43-203ENST00000588210 RBM39Q14498 530 aaKnown RBP12.58□□□□□ -0.4
CCDC43-203ENST00000588210 HFEQ30201 348 aa12.58□□□□□ -0.4
CCDC43-203ENST00000588210 DHRS7BQ6IAN0 325 aaPredicted RBP12.58□□□□□ -0.4
CCDC43-203ENST00000588210 EIF5AL1Q6IS14 154 aaKnown RBP12.58□□□□□ -0.4
CCDC43-203ENST00000588210 CNEP1R1Q8N9A8 125 aa12.58□□□□□ -0.4
CCDC43-203ENST00000588210 SPTSSAQ969W0 71 aa12.58□□□□□ -0.4
CCDC43-203ENST00000588210 DECR2Q9NUI1 292 aa12.58□□□□□ -0.4
CCDC43-203ENST00000588210 ZNF701Q9NV72 531 aaPredicted RBP12.58□□□□□ -0.4
CCDC43-203ENST00000588210 COL12A1Q99715 3063 aa12.58□□□□□ -0.4
CCDC43-203ENST00000588210 HKR1P10072 659 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 ABLIM2Q6H8Q1 611 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 HAGHLQ6PII5 290 aaPredicted RBP12.57□□□□□ -0.4
CCDC43-203ENST00000588210 LRRC18Q8N456 261 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 SPSB1Q96BD6 273 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 ZNF775Q96BV0 537 aaPredicted RBP12.57□□□□□ -0.4
CCDC43-203ENST00000588210 MICU1Q9BPX6 476 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 BCO1Q9HAY6 547 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 OR2S2Q9NQN1 319 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 UQCC1Q9NVA1 299 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 JKAMPQ9P055 326 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 EDARQ9UNE0 448 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 A1L4Q6 167 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 SNAPINO95295 136 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 KNG1P01042 644 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 SERPINA5P05154 406 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 VWA1Q6PCB0 445 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 C6orf201Q7Z4U5 140 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 SPAG16Q8N0X2 631 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 SEMA6DQ8NFY4 1073 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 STARD4Q96DR4 205 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 ZNF2Q9BSG1 426 aaPredicted RBP12.57□□□□□ -0.4
CCDC43-203ENST00000588210 RBM24Q9BX46 236 aaKnown RBP12.57□□□□□ -0.4
CCDC43-203ENST00000588210 TLNRD1Q9H1K6 362 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 ELL3Q9HB65 397 aaPredicted RBP12.57□□□□□ -0.4
CCDC43-203ENST00000588210 TREM1Q9NP99 234 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 GSKIPQ9P0R6 139 aa12.57□□□□□ -0.4
CCDC43-203ENST00000588210 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
CCDC43-203ENST00000588210 LRRK2Q5S007 2527 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 NKX2-6A6NCS4 301 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 CRYM-AS1A6NIL9 109 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 ZNF724A8MTY0 619 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 MSTNO14793 375 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 SFTPBP07988 381 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 DBHP09172 617 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 CRYGSP22914 178 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 GABRR1P24046 479 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 MRPS34P82930 218 aaKnown RBP12.56□□□□□ -0.4
CCDC43-203ENST00000588210 IAH1Q2TAA2 248 aaPredicted RBP12.56□□□□□ -0.4
CCDC43-203ENST00000588210 SNAI3Q3KNW1 292 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 FAM27BQ5VT28 67 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 TMEM268Q5VZI3 342 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 RPL7L1Q6DKI1 246 aaKnown RBP12.56□□□□□ -0.4
CCDC43-203ENST00000588210 TMEM200AQ86VY9 491 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 SGPP2Q8IWX5 399 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 TUSC5Q8IXB3 177 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 C20orf196Q8IYI0 205 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 NRIP2Q9BQI9 281 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 ULBP2Q9BZM5 246 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 PLEKHJ1Q9NW61 149 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 PLEK2Q9NYT0 353 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 ANXA10Q9UJ72 324 aa12.56□□□□□ -0.4
CCDC43-203ENST00000588210 IGKV3D-15A0A087WSY6 115 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 ZNF716A6NP11 495 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 PRSS44E7EML9 344 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 H7C2Y5 167 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 GAPDHP04406 335 aaKnown RBP12.55□□□□□ -0.4
CCDC43-203ENST00000588210 SULT1A2P50226 295 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 ASCL1P50553 236 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 CAV2P51636 162 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 TFF3Q07654 80 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 RAB35Q15286 201 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 FBXL19-AS1Q494R0 122 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 TMEM88Q6PEY1 159 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 IQCF2Q8IXL9 164 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 ZIC4Q8N9L1 334 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 SGK3Q96BR1 496 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 FBXO17Q96EF6 278 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 CPNE2Q96FN4 548 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms