RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 DUX4L7P0CJ90 424 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 PPIAL4FP0DN26 164 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 LMO1P25800 156 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 PRDX2P32119 198 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 GDNFP39905 211 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 ARL6IP1Q15041 203 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 HFEQ30201 348 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 PAN3Q58A45 887 aaKnown RBP9.46□□□□□ -0.9
VMP1-207ENST00000588131 STUMQ69YW2 141 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 HIST2H2BCQ6DN03 193 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 DUX4L9Q6RFH8 374 aaPredicted RBP9.46□□□□□ -0.9
VMP1-207ENST00000588131 Q6ZPA2 131 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 GVQW1Q8N7I0 195 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 ANGPTL6Q8NI99 470 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 NRGNQ92686 78 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 C14orf79Q96F83 325 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 PPA2Q9H2U2 334 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 LIME1Q9H400 295 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 SPACA1Q9HBV2 294 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 DUX4Q9UBX2 424 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 MTFP1Q9UDX5 166 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 GLS2Q9UI32 602 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 TBC1D24Q9ULP9 559 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 PPIAL4AQ9Y536 164 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 HRNRQ86YZ3 2850 aaPredicted RBP9.46□□□□□ -0.9
VMP1-207ENST00000588131 ABCA4P78363 2273 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 MYO18BQ8IUG5 2567 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 MCRIP1C9JLW8 97 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 IFNL4K9M1U5 179 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 PLA2G10O15496 165 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 RBBP9O75884 186 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 GYPAP02724 150 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 DAOP14920 347 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 GABRA2P47869 451 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 OR3A1P47881 315 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 KLF9Q13886 244 aaPredicted RBP9.45□□□□□ -0.9
VMP1-207ENST00000588131 MICBQ29980 383 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 ZNF57Q68EA5 555 aaPredicted RBP9.45□□□□□ -0.9
VMP1-207ENST00000588131 C1orf87Q8N0U7 546 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 OR4S1Q8NGB4 309 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 PLPPR1Q8TBJ4 325 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 NEK7Q8TDX7 302 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 MAFIPQ8WZ33 124 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 GAFA1Q96PS6 74 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 CCL19Q99731 98 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 CMSS1Q9BQ75 279 aaKnown RBP9.45□□□□□ -0.9
VMP1-207ENST00000588131 CHST6Q9GZX3 395 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 SEBOXQ9HB31 216 aaPredicted RBP9.45□□□□□ -0.9
VMP1-207ENST00000588131 ETAA1Q9NY74 926 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 ZNF230Q9UIE0 474 aaPredicted RBP9.45□□□□□ -0.9
VMP1-207ENST00000588131 ANAPC10Q9UM13 185 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 MAB21L2Q9Y586 359 aa9.45□□□□□ -0.9
VMP1-207ENST00000588131 DSCAMO60469 2012 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 IGKV1D-8A0A087WSZ0 117 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 ANKRD20A5PA0PJZ0 165 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 H3BUI4 141 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 ZNF737O75373 536 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 F12P00748 615 aaPredicted RBP9.44□□□□□ -0.9
VMP1-207ENST00000588131 GLAP06280 429 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 FCGR3AP08637 254 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 SELLP14151 372 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 MUC1P15941 1255 aaPredicted RBP9.44□□□□□ -0.9
VMP1-207ENST00000588131 RCVRNP35243 200 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 INPP1P49441 399 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 KRTAP10-9P60411 292 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 ATXN7L3Q14CW9 347 aaPredicted RBP9.44□□□□□ -0.9
VMP1-207ENST00000588131 ZMYND11Q15326 602 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 SHEQ5VZ18 495 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 OR52W1Q6IF63 320 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 ZNF788Q6ZQV5 615 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 C17orf107Q6ZR85 190 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 TOMM5Q8N4H5 51 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 MRPL30Q8TCC3 161 aaKnown RBP9.44□□□□□ -0.9
VMP1-207ENST00000588131 SNAPC3Q92966 411 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 CCL13Q99616 98 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 SHARPINQ9H0F6 387 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 DLL4Q9NR61 685 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 ZNF701Q9NV72 531 aaPredicted RBP9.44□□□□□ -0.9
VMP1-207ENST00000588131 ING3Q9NXR8 418 aa9.44□□□□□ -0.9
VMP1-207ENST00000588131 TRAV38-1A0A0B4J264 116 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 ISPDA4D126 451 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 TNFRSF13BO14836 293 aaPredicted RBP9.43□□□□□ -0.9
VMP1-207ENST00000588131 SSX4O60224 188 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 NAPSAO96009 420 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 IGHV2-70P01814 119 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 IGHV4-39P01824 125 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 NAT1P18440 290 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 EFNA4P52798 201 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 ACTBP60709 375 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 BTG1P62324 171 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 ACTG1P63261 375 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 MRPS11P82912 194 aaKnown RBP9.43□□□□□ -0.9
VMP1-207ENST00000588131 SSBP1Q04837 148 aaKnown RBP9.43□□□□□ -0.9
VMP1-207ENST00000588131 ASAH1Q13510 395 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 RBM39Q14498 530 aaKnown RBP9.43□□□□□ -0.9
VMP1-207ENST00000588131 AVPI1Q5T686 147 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 LYPD2Q6UXB3 125 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 HOGA1Q86XE5 327 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 FAM216BQ8N7L0 139 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms