RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 C5orf52A6NGY3 159 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 NTN3O00634 580 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 RFPL3SP0C7P2 107 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 GNRHRP30968 328 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FOLR3P41439 243 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 NOVA1P51513 510 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 C21orf62-AS1Q17RA5 79 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PMS2CLQ68D20 193 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SLC25A26Q70HW3 274 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 OR2C3Q8N628 320 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 OR2V1Q8NHB1 315 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PBDC1Q9BVG4 233 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 C1QTNF5Q9BXJ0 243 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SIT1Q9Y3P8 196 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 NKX2-6A6NCS4 301 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TRDCB7Z8K6 153 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 UMAD1C9J7I0 102 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 K7N7A8 449 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 M0R036 132 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 MMP7P09237 267 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 AGAP20933 346 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 NPBWR2P48146 333 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 CLDN15P56746 228 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ZFP36L1Q07352 338 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TRA2AQ13595 282 aaKnown RBP eCLIP12.23□□□□□ -0.451e-7■□□□□ 8.1
CDK5RAP3-237ENST00000585163 Q6ZS49 121 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 STX12Q86Y82 276 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ZNF561Q8N587 486 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 LFNGQ8NES3 379 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TMEM56Q96MV1 263 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SLC35B3Q9H1N7 401 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PARPBPQ9NWS1 579 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TMEM56-RWDD3S4R434 201 aa12.23□□□□□ -0.45
CDK5RAP3-237ENST00000585163 A0A1B0GW64 132 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 LRRC3CA6NJW4 275 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 RPL36A-HNRNPH2H7BZ11 118 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SLC39A7Q92504 469 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PRDM14Q9GZV8 571 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SLC7A10Q9NS82 523 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A10PA6NDY2 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A18PA6NE21 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A16PA6NEW6 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A20PA6NIJ5 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A8PA6NJQ4 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A7PA6NKC0 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A22PA8MWA6 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A12PA8MX19 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A5PA8MXJ8 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A23PA8MXZ1 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 GATCO43716 136 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 NDUFS6O75380 124 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ACAA1P09110 424 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A15PP0C7V4 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A13PP0C7W8 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A14PP0C7W9 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM90A24PP0C7X0 464 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ASCL1P50553 236 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ZNF266Q14584 549 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 EIF2S3LQ2VIR3 472 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TMEM182Q6ZP80 229 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 CPEB3Q8NE35 698 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 OR1J1Q8NGS3 322 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ISOC2Q96AB3 205 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 C20orf24Q9BUV8 137 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 KCNJ16Q9NPI9 418 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM86C1Q9NVL1 165 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FBXO7Q9Y3I1 522 aa12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TNRC6BQ9UPQ9 1833 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM24AA6NFZ4 105 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 UBE2CO00762 179 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PPP1CCP36873 323 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 NKX2-1P43699 371 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SSPNQ14714 243 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 RHEBQ15382 184 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SRSF7Q16629 238 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 WIPI1Q5MNZ9 446 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 COLCA1Q6ZS62 124 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 DPPA2Q7Z7J5 298 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM213BQ8TBF2 198 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 EXTL1Q92935 676 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SMDT1Q9H4I9 107 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 RYDENQ9NUL5 291 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 MED19A0JLT2 244 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 A6NLC8 198 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 CYTIPO60759 359 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TRAPPC6AO75865 159 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 DAOP14920 347 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 RND3P61587 244 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 Q0VFX4 171 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TGIF1Q15583 401 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 CDCP2Q5VXM1 449 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TBC1D26Q86UD7 250 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 BATF2Q8N1L9 274 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SNIP1Q8TAD8 396 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ABHD3Q8WU67 409 aa12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 UBE2J1Q9Y385 318 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-237ENST00000585163 VPS13AQ96RL7 3174 aa12.21□□□□□ -0.46
CDK5RAP3-237ENST00000585163 A0A1B0GWJ7 208 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 A0A1W2PPH5 198 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms