RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 RIPPLY1Q0D2K3 151 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 MRPL28Q13084 256 aaKnown RBP9.79□□□□□ -0.84
TOP3A-215ENST00000583328 C9orf152Q5JTZ5 239 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 NKAPLQ5M9Q1 402 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 RBM48Q5RL73 367 aaKnown RBP9.79□□□□□ -0.84
TOP3A-215ENST00000583328 CASC10Q5T4H9 136 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 BCL2L15Q5TBC7 163 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 FDX2Q6P4F2 183 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 TMPRSS11AQ6ZMR5 421 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 GDPD3Q7L5L3 318 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 KRT74Q7RTS7 529 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 COMMD2Q86X83 199 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 CATSPERDQ86XM0 798 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 ZNF573Q86YE8 665 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 ELMOD2Q8IZ81 293 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 OSR2Q8N2R0 312 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 ZNF676Q8N7Q3 588 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 MUC7Q8TAX7 377 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 ITFG2Q969R8 447 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 PELI1Q96FA3 418 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 ZNF714Q96N38 554 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 SLC25A33Q9BSK2 321 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 OR52A1Q9UKL2 312 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 GTF2A1LQ9UNN4 478 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 DYNC2H1Q8NCM8 4307 aaKnown RBP9.79□□□□□ -0.84
TOP3A-215ENST00000583328 IGHV2-26A0A0B4J1V2 119 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 PSMB11A5LHX3 300 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 NUDT19A8MXV4 375 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 PTGES3LE9PB15 166 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 J3QT63 122 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 NOS1APO75052 506 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-215ENST00000583328 NRASP01111 189 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 CDK1P06493 297 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 HTR1AP08908 422 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 ATP6V1B1P15313 513 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 CRHBPP24387 322 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 HTR1DP28221 377 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 C21orf33P30042 268 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-215ENST00000583328 MYCNOSP40205 109 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 RNLSQ5VYX0 342 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 OR52N1Q8NH53 320 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 RBM14Q96PK6 669 aaKnown RBP9.78□□□□□ -0.84
TOP3A-215ENST00000583328 DUSP21Q9H596 190 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 ISG20L2Q9H9L3 353 aaKnown RBP9.78□□□□□ -0.84
TOP3A-215ENST00000583328 PAK1IP1Q9NWT1 392 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-215ENST00000583328 SLC22A13Q9Y226 551 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 PIGLQ9Y2B2 252 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 POLDIP2Q9Y2S7 368 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 LSM4Q9Y4Z0 139 aaKnown RBP9.78□□□□□ -0.84
TOP3A-215ENST00000583328 SESN1Q9Y6P5 492 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 TENM2Q9NT68 2774 aa9.78□□□□□ -0.84
TOP3A-215ENST00000583328 hADV38S2A0JD32 116 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 MYL12BO14950 172 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 OR2F2O95006 317 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 IGLV3-1P01715 115 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 CCR9P51686 369 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 ARHGDIBP52566 201 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 GBX2P52951 348 aaPredicted RBP9.77□□□□□ -0.85
TOP3A-215ENST00000583328 GABARAPL2P60520 117 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 RPL23AP62750 156 aaKnown RBP9.77□□□□□ -0.85
TOP3A-215ENST00000583328 OR2G6Q5TZ20 316 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 C8orf86Q6ZUL3 223 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 ZNF329Q86UD4 541 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 PRSS35Q8N3Z0 413 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 OR2G2Q8NGZ5 317 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 OR51E1Q8TCB6 317 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 RNF166Q96A37 237 aaPredicted RBP9.77□□□□□ -0.85
TOP3A-215ENST00000583328 PRR25Q96S07 402 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 NRIP2Q9BQI9 281 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 CLEC7AQ9BXN2 247 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 TMEM133Q9H2Q1 129 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 GPR84Q9NQS5 396 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 DPM3Q9P2X0 92 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 CLEC2DQ9UHP7 191 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 ENPP5Q9UJA9 477 aa9.77□□□□□ -0.85
TOP3A-215ENST00000583328 RGS10O43665 173 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 UBCP0CG48 685 aaKnown RBP9.76□□□□□ -0.85
TOP3A-215ENST00000583328 CCL1P22362 96 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 KIR3DL2P43630 455 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 RAB25P57735 213 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 NANOS3P60323 173 aaKnown RBP9.76□□□□□ -0.85
TOP3A-215ENST00000583328 MEF2CQ06413 473 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-215ENST00000583328 ALKBH1Q13686 389 aaKnown RBP9.76□□□□□ -0.85
TOP3A-215ENST00000583328 EDDM3AQ14507 147 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 CCDC58Q4VC31 144 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 C18orf65Q6ZTR6 163 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 OR2W3Q7Z3T1 314 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 OR4P4Q8NGL7 312 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 P2RX4Q99571 388 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 MND1Q9BWT6 205 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 YTHDF1Q9BYJ9 559 aaKnown RBP9.76□□□□□ -0.85
TOP3A-215ENST00000583328 HES4Q9HCC6 221 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 ZFP57Q9NU63 452 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 GAR1Q9NY12 217 aaKnown RBP9.76□□□□□ -0.85
TOP3A-215ENST00000583328 FRRS1LQ9P0K9 344 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 ERGIC3Q9Y282 383 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 LRRC42Q9Y546 428 aa9.76□□□□□ -0.85
TOP3A-215ENST00000583328 BIRC6Q9NR09 4857 aa9.75□□□□□ -0.85
TOP3A-215ENST00000583328 A0A1B0GTI1 187 aa9.75□□□□□ -0.85
TOP3A-215ENST00000583328 OR4C45A6NMZ5 311 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms