RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 MS4A15Q8N5U1 240 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 CHST4Q8NCG5 386 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 GCDHQ92947 438 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 HEXA-AS1Q9H8Q6 139 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 ING3Q9NXR8 418 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 FOXJ3Q9UPW0 622 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 SF3B6Q9Y3B4 125 aaKnown RBP10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 A0A0G2JK05 382 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 FUOMA2VDF0 154 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 SLC33A1O00400 549 aaPredicted RBP10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 HSPB6O14558 160 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 PIN1P1O15428 100 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 PAHP00439 452 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 RNASE1P07998 156 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 MELTFP08582 738 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 FBP1P09467 338 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 SERPINA2P20848 420 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 LMO1P25800 156 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 SAA4P35542 130 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 MAP2K4P45985 399 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 P2RX3P56373 397 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 AESQ08117 197 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 ATXN7L3Q14CW9 347 aaPredicted RBP10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 PIGYQ3MUY2 71 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 ASCL4Q6XD76 172 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 OSR2Q8N2R0 312 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 C11orf42Q8N5U0 333 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 MUL1Q969V5 352 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 ZNF714Q96N38 554 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 PRDM13Q9H4Q3 707 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 TCF7L1Q9HCS4 588 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 MRPS28Q9Y2Q9 187 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 LINC00312Q9Y6C7 94 aa10.3□□□□□ -0.76
SMARCE1-218ENST00000582955 C17orf98A8MV24 154 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 CLDN34H7C241 214 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 ERP29P30040 261 aaKnown RBP10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 DLX6P56179 175 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 GPR50Q13585 617 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 IL13RA2Q14627 380 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 SLC22A6Q4U2R8 563 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 PAN3Q58A45 887 aaKnown RBP10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 KRBOX4Q5JUW0 171 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 FAM27D1Q5T7N8 215 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 AWAT2Q6E213 333 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 HCP5Q6MZN7 132 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 C12orf54Q6X4T0 127 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 TCF23Q7RTU1 214 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 CEACAM19Q7Z692 300 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 NKAIN3Q8N8D7 197 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 OR51T1Q8NGJ9 327 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 SSMEM1Q8WWF3 244 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 TMEM203Q969S6 136 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 PCDHB16Q9NRJ7 776 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 IL36GQ9NZH8 169 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 ST3GAL6Q9Y274 331 aa10.29□□□□□ -0.76
SMARCE1-218ENST00000582955 TRGV10A0A0A0MS01 117 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 A0A1W2PP11 408 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 ZNF780AO75290 641 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 OR7C1O76099 320 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 IGHV4-59P01825 116 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 RBP4P02753 201 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 IGHV1-8P0DP01 117 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 GLIPR1P48060 266 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 LGALS4P56470 323 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 RBM11P57052 281 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 RPS25P62851 125 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 MLLT11Q13015 90 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 GPR176Q14439 515 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 TBCEQ15813 527 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 MIDNQ504T8 468 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 HSD17B12Q53GQ0 312 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 GLIPR1L1Q6UWM5 242 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 UNQ9370/PRO34162Q6UXP9 181 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 LDLRAD3Q86YD5 345 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 CDH26Q8IXH8 852 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 TMEM86BQ8N661 226 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 Q8NFD4 153 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 OR13D1Q8NGV5 346 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 MGLLQ99685 303 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 CHIAQ9BZP6 476 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 ISYNA1Q9NPH2 558 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 UBE2J1Q9Y385 318 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 POMT1Q9Y6A1 747 aa10.28□□□□□ -0.76
SMARCE1-218ENST00000582955 TRAV24A0A0B4J272 114 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 ODAMA1E959 279 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 TMEM89A2RUT3 159 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 MEGF11A6BM72 1044 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 BTBD17A6NE02 478 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 GEMIN2O14893 280 aaKnown RBP10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 DENRO43583 198 aaKnown RBP10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 CLPXO76031 633 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 CSN2P05814 226 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 GTF2F2P13984 249 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 CPEP16870 476 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 GABARAPL2P60520 117 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 DYNC1I2Q13409 638 aaKnown RBP10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 TPBGQ13641 420 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 TRAM1Q15629 374 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 NHLRC3Q5JS37 347 aa10.27□□□□□ -0.77
SMARCE1-218ENST00000582955 C16orf87Q6PH81 154 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms