RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, human

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SS18-222	ENST00000582792	VSIG8	P0DPA2	414 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	VDAC2	P45880	294 aa	Predicted RBP	10.9	□□□□□ -0.66
SS18-222	ENST00000582792	CEBPD	P49716	269 aa	Predicted RBP	10.9	□□□□□ -0.66
SS18-222	ENST00000582792	DYNLT3	P51808	116 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	BLCAP	P62952	87 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	GPR50	Q13585	617 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	SSX2	Q16385	188 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	TMEM95	Q3KNT9	176 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	CLVS2	Q5SYC1	327 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	PLCXD3	Q63HM9	321 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	ZNF626	Q68DY1	528 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	MOB3C	Q70IA8	216 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	ZNF676	Q8N7Q3	588 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	OR11H6	Q8NGC7	330 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	OR13D1	Q8NGV5	346 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	OR5AK2	Q8NH90	309 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	SMIM19	Q96E16	107 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	ZNF488	Q96MN9	340 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	OCSTAMP	Q9BR26	566 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792	PIGL	Q9Y2B2	252 aa		10.9	□□□□□ -0.66
SS18-222	ENST00000582792		J3QT63	122 aa		10.89	□□□□□ -0.67
SS18-222	ENST00000582792	SYNGR1	O43759	233 aa		10.89	□□□□□ -0.67
SS18-222	ENST00000582792	NOS1AP	O75052	506 aa	Predicted RBP	10.89	□□□□□ -0.67
SS18-222	ENST00000582792	ZFPL1	O95159	310 aa		10.89	□□□□□ -0.67
SS18-222	ENST00000582792	RBP4	P02753	201 aa		10.89	□□□□□ -0.67
SS18-222	ENST00000582792	PF4V1	P10720	104 aa		10.89	□□□□□ -0.67
SS18-222	ENST00000582792	SPHAR	Q15513	63 aa		10.89	□□□□□ -0.67
SS18-222	ENST00000582792	TBCE	Q15813	527 aa	Predicted RBP	10.89	□□□□□ -0.67
SS18-222	ENST00000582792	KCTD21	Q4G0X4	260 aa		10.89	□□□□□ -0.67
SS18-222	ENST00000582792	UTS2B	Q765I0	119 aa		10.89	□□□□□ -0.67
SS18-222	ENST00000582792	OR5AU1	Q8NGC0	362 aa		10.89	□□□□□ -0.67
SS18-222	ENST00000582792	PP6455	Q8WZ26	134 aa		10.89	□□□□□ -0.67
SS18-222	ENST00000582792	GATB	O75879	557 aa	Known RBP	10.88	□□□□□ -0.67
SS18-222	ENST00000582792	LALBA	P00709	142 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	SERPINA3	P01011	423 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	NRAS	P01111	189 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	GTF2A1	P52655	376 aa	Predicted RBP	10.88	□□□□□ -0.67
SS18-222	ENST00000582792	DEFB121	Q5J5C9	76 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	ZNF573	Q86YE8	665 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	RDH10	Q8IZV5	341 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	SVOP	Q8N4V2	548 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	GPR148	Q8TDV2	347 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	THRSP	Q92748	146 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	RCC1L	Q96I51	464 aa	Known RBP	10.88	□□□□□ -0.67
SS18-222	ENST00000582792	NRIP2	Q9BQI9	281 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	HES4	Q9HCC6	221 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	OR14J1	Q9UGF5	321 aa		10.88	□□□□□ -0.67
SS18-222	ENST00000582792	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.88	□□□□□ -0.67
SS18-222	ENST00000582792	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792		K7N7A8	449 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	F2RL2	O00254	374 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	NXPH2	O95156	264 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	DUS4L	O95620	317 aa	Known RBP	10.87	□□□□□ -0.67
SS18-222	ENST00000582792	PF4	P02776	101 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	ZNF728	P0DKX0	622 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	IGHV1-8	P0DP01	117 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	JUNB	P17275	347 aa	Predicted RBP	10.87	□□□□□ -0.67
SS18-222	ENST00000582792	AZGP1	P25311	298 aa	Known RBP	10.87	□□□□□ -0.67
SS18-222	ENST00000582792	HAAO	P46952	286 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	KRTAP10-11	P60412	298 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	DYNC1I2	Q13409	638 aa	Known RBP	10.87	□□□□□ -0.67
SS18-222	ENST00000582792	ODF4	Q2M2E3	257 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	YIF1B	Q5BJH7	314 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	TCTEX1D4	Q5JR98	221 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	XAF1	Q6GPH4	301 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	ZNF367	Q7RTV3	350 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	MS4A15	Q8N5U1	240 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	GHSR	Q92847	366 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	PGLYRP3	Q96LB9	341 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	PDCD1LG2	Q9BQ51	273 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	CHST5	Q9GZS9	411 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	CCDC90B	Q9GZT6	254 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	PLEKHA1	Q9HB21	404 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	POLDIP2	Q9Y2S7	368 aa		10.87	□□□□□ -0.67
SS18-222	ENST00000582792	TRBV5-5	A0A0J9YX44	114 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	PQLC2L	A1A4F0	135 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	FAM90A22P	A8MWA6	464 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	ZNF20	P17024	532 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	FUT6	P51993	359 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	MLLT11	Q13015	90 aa	Predicted RBP	10.86	□□□□□ -0.67
SS18-222	ENST00000582792	TPBG	Q13641	420 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	MINOS1	Q5TGZ0	78 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	ZNF773	Q6PK81	442 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.86	□□□□□ -0.67
SS18-222	ENST00000582792	PARP16	Q8N5Y8	322 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	DNAAF1	Q8NEP3	725 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	OR13C3	Q8NGS6	347 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	FCGR1B	Q92637	280 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	FGGY	Q96C11	551 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	WWC2-AS2	Q96NR7	200 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	NEK6	Q9HC98	313 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	ACOT13	Q9NPJ3	140 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	SLC7A11	Q9UPY5	501 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	DHDH	Q9UQ10	334 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	HILPDA	Q9Y5L2	63 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.86	□□□□□ -0.67
SS18-222	ENST00000582792	MINOS1-NBL1	R4GNA1	71 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	DSCAML1	Q8TD84	2053 aa		10.86	□□□□□ -0.67
SS18-222	ENST00000582792	TCRBV4S1A1T	A0A5B7	111 aa		10.85	□□□□□ -0.67
SS18-222	ENST00000582792	MEX3A	A1L020	520 aa	Known RBP	10.85	□□□□□ -0.67

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