RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 OR4A8P0C604 315 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 VSIG10L2P0DP72 767 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 ZNF44P15621 663 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 EGR1P18146 543 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 GLRA1P23415 457 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 RBMXP38159 391 aaKnown RBP8.88□□□□□ -0.99
SS18-217ENST00000580958 OR3A3P47888 321 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 ZNF81P51508 661 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 ARPC4P59998 168 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 RRAS2P62070 204 aaPredicted RBP8.88□□□□□ -0.99
SS18-217ENST00000580958 HOXA4Q00056 320 aaPredicted RBP8.88□□□□□ -0.99
SS18-217ENST00000580958 SORDQ00796 357 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 CDK10Q15131 360 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 ZMYND11Q15326 602 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 FIP1L1Q6UN15 594 aaKnown RBP8.88□□□□□ -0.99
SS18-217ENST00000580958 Q6ZPA2 131 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 SLC36A1Q7Z2H8 476 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 MOGAT3Q86VF5 341 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 OR5AP2Q8NGF4 316 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 OR10Z1Q8NGY1 313 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 MRGPRFQ96AM1 343 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 CNTNAP3BQ96NU0 1288 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 SLC25A21Q9BQT8 299 aaPredicted RBP8.88□□□□□ -0.99
SS18-217ENST00000580958 SEC22CQ9BRL7 303 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 DPCDQ9BVM2 203 aaPredicted RBP8.88□□□□□ -0.99
SS18-217ENST00000580958 CNTNAP3Q9BZ76 1288 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 WDR13Q9H1Z4 485 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 PPA2Q9H2U2 334 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 IFT22Q9H7X7 185 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 ZNF286AQ9HBT8 521 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 C12orf4Q9NQ89 552 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 ETAA1Q9NY74 926 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 EHFQ9NZC4 300 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 OR14J1Q9UGF5 321 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 VSIG4Q9Y279 399 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 DSCAML1Q8TD84 2053 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 TMEM82A0PJX8 343 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 OR2AT4A6NND4 320 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 E7EQL1 145 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 SLC33A1O00400 549 aaPredicted RBP8.87□□□□□ -0.99
SS18-217ENST00000580958 OR2H2O95918 312 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 HAND1O96004 215 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 PLAUP00749 431 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 HPXP02790 462 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 GLAP06280 429 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 CEBPDP49716 269 aaPredicted RBP8.87□□□□□ -0.99
SS18-217ENST00000580958 MECP2P51608 486 aaKnown RBP8.87□□□□□ -0.99
SS18-217ENST00000580958 TSPAN5P62079 268 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 TNFAIP6P98066 277 aaPredicted RBP8.87□□□□□ -0.99
SS18-217ENST00000580958 TLE1Q04724 770 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 TFF3Q07654 80 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 FCN2Q15485 313 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 PAN3Q58A45 887 aaKnown RBP8.87□□□□□ -0.99
SS18-217ENST00000580958 SPIN3Q5JUX0 258 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 ATPAF1Q5TC12 328 aaPredicted RBP8.87□□□□□ -0.99
SS18-217ENST00000580958 METTL11BQ5VVY1 283 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 GLDNQ6ZMI3 551 aaPredicted RBP8.87□□□□□ -0.99
SS18-217ENST00000580958 ACP7Q6ZNF0 438 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 BOLLQ8N9W6 283 aaKnown RBP8.87□□□□□ -0.99
SS18-217ENST00000580958 MRPL30Q8TCC3 161 aaKnown RBP8.87□□□□□ -0.99
SS18-217ENST00000580958 ST6GAL2Q96JF0 529 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 MED28Q9H204 178 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 FN3KRPQ9HA64 309 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 ANXA10Q9UJ72 324 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 EDARQ9UNE0 448 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 ABCA4P78363 2273 aa8.87□□□□□ -0.99
SS18-217ENST00000580958 TUBAL3A6NHL2 446 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 VSTM5A8MXK1 200 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 SH2D1BO14796 132 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 SSNA1O43805 119 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 NAPSAO96009 420 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 TFF1P04155 84 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 GSTT2P0CG29 244 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 TNFSF4P23510 183 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 RBM39Q14498 530 aaKnown RBP8.86□□□□□ -0.99
SS18-217ENST00000580958 ZNF146Q15072 292 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 GRK1Q15835 563 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 SMIM21Q3B7S5 101 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 BEX5Q5H9J7 111 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 C17orf107Q6ZR85 190 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 OVCH2Q7RTZ1 564 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 TMED4Q7Z7H5 227 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 LHFPL1Q86WI0 220 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 TMEM17Q86X19 198 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 ARRDC1Q8N5I2 433 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 ZDHHC22Q8N966 263 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 OR52B4Q8NGK2 314 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 OR6F1Q8NGZ6 308 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 MARCH1Q8TCQ1 289 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 CAPSLQ8WWF8 208 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 Q9N2K0 584 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 GLS2Q9UI32 602 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 ZNF221Q9UK13 617 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 ZDHHC8Q9ULC8 765 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 RNF115Q9Y4L5 304 aa8.86□□□□□ -0.99
SS18-217ENST00000580958 SRRM5B3KS81 715 aa8.85□□□□□ -0.99
SS18-217ENST00000580958 ZG16O60844 167 aa8.85□□□□□ -0.99
SS18-217ENST00000580958 CLDN14O95500 239 aa8.85□□□□□ -0.99
SS18-217ENST00000580958 KNG1P01042 644 aa8.85□□□□□ -0.99
SS18-217ENST00000580958 LOXP28300 417 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms