RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 PAN3Q58A45 887 aaKnown RBP15.94■□□□□ 0.14
SS18-209ENST00000578595 LIPKQ5VXJ0 399 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 AWAT2Q6E213 333 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 Q6YL49 198 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 CHST4Q8NCG5 386 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 TNFRSF14Q92956 283 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 DUSP21Q9H596 190 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 SEBOXQ9HB31 216 aaPredicted RBP15.94■□□□□ 0.14
SS18-209ENST00000578595 TCF7L1Q9HCS4 588 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 FOXJ3Q9UPW0 622 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 MRPS28Q9Y2Q9 187 aaKnown RBP15.94■□□□□ 0.14
SS18-209ENST00000578595 LSM2Q9Y333 95 aaKnown RBP15.94■□□□□ 0.14
SS18-209ENST00000578595 SLC33A1O00400 549 aaPredicted RBP15.93■□□□□ 0.14
SS18-209ENST00000578595 RNASE1P07998 156 aaKnown RBP15.93■□□□□ 0.14
SS18-209ENST00000578595 LGALS4P56470 323 aa15.93■□□□□ 0.14
SS18-209ENST00000578595 INSL4Q14641 139 aa15.93■□□□□ 0.14
SS18-209ENST00000578595 IRF3Q14653 427 aa15.93■□□□□ 0.14
SS18-209ENST00000578595 ACSM3Q53FZ2 586 aa15.93■□□□□ 0.14
SS18-209ENST00000578595 KRBOX4Q5JUW0 171 aa15.93■□□□□ 0.14
SS18-209ENST00000578595 PRSS48Q7RTY5 328 aa15.93■□□□□ 0.14
SS18-209ENST00000578595 OSR2Q8N2R0 312 aa15.93■□□□□ 0.14
SS18-209ENST00000578595 MS4A15Q8N5U1 240 aa15.93■□□□□ 0.14
SS18-209ENST00000578595 SSMEM1Q8WWF3 244 aa15.93■□□□□ 0.14
SS18-209ENST00000578595 TMEM203Q969S6 136 aa15.93■□□□□ 0.14
SS18-209ENST00000578595 UNKLQ9H9P5 680 aaKnown RBP15.93■□□□□ 0.14
SS18-209ENST00000578595 LINC00312Q9Y6C7 94 aa15.93■□□□□ 0.14
SS18-209ENST00000578595 TRGV10A0A0A0MS01 117 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 A0A0G2JK05 382 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 HAX1O00165 279 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 OR7C1O76099 320 aaPredicted RBP15.92■□□□□ 0.14
SS18-209ENST00000578595 CRYBA1P05813 215 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 DYNC1I2Q13409 638 aaKnown RBP15.92■□□□□ 0.14
SS18-209ENST00000578595 IL13RA2Q14627 380 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 TUSC1Q2TAM9 212 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 ELP2Q6IA86 826 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 Q6P435 159 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 NKAIN3Q8N8D7 197 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 NEK7Q8TDX7 302 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 PCDHB16Q9NRJ7 776 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 ST3GAL6Q9Y274 331 aa15.92■□□□□ 0.14
SS18-209ENST00000578595 C17orf98A8MV24 154 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 CLDN34H7C241 214 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 GPX5O75715 221 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 CLPXO76031 633 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 IGHV4-59P01825 116 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 GLIPR1P48060 266 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 ATAD3CQ5T2N8 411 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 FAM27D1Q5T7N8 215 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 GLIPR1L1Q6UWM5 242 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 TCF23Q7RTU1 214 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 CEACAM19Q7Z692 300 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 OR13D1Q8NGV5 346 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 CHIAQ9BZP6 476 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 DPAGT1Q9H3H5 408 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 GAL3ST2Q9H3Q3 398 aa15.91■□□□□ 0.14
SS18-209ENST00000578595 A0A1W2PP11 408 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 PIN1P1O15428 100 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 ZNF780AO75290 641 aaPredicted RBP15.9■□□□□ 0.14
SS18-209ENST00000578595 ARG1P05089 322 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 IGHV1-8P0DP01 117 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 LMO1P25800 156 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 ERP29P30040 261 aaKnown RBP15.9■□□□□ 0.14
SS18-209ENST00000578595 GLP1RP43220 463 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 DLX6P56179 175 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 RBM11P57052 281 aaKnown RBP15.9■□□□□ 0.14
SS18-209ENST00000578595 RPS25P62851 125 aaKnown RBP15.9■□□□□ 0.14
SS18-209ENST00000578595 HSD17B12Q53GQ0 312 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 HCP5Q6MZN7 132 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 C16orf87Q6PH81 154 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 OR51T1Q8NGJ9 327 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 SLITRK2Q9H156 845 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 PRDM13Q9H4Q3 707 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 IL36GQ9NZH8 169 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 ZNRD1Q9P1U0 126 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 UBE2J1Q9Y385 318 aaPredicted RBP15.9■□□□□ 0.14
SS18-209ENST00000578595 POMT1Q9Y6A1 747 aa15.9■□□□□ 0.14
SS18-209ENST00000578595 ODAMA1E959 279 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 TMEM89A2RUT3 159 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 RBP4P02753 201 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 GTF2F2P13984 249 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 MLLT11Q13015 90 aaPredicted RBP15.89■□□□□ 0.13
SS18-209ENST00000578595 GPR176Q14439 515 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 MIDNQ504T8 468 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 PRAMEF5Q5TYX0 476 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 ASCL4Q6XD76 172 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 LDLRAD3Q86YD5 345 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 C11orf42Q8N5U0 333 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 TMEM86BQ8N661 226 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 TAF15Q92804 592 aaKnown RBP eCLIP15.89■□□□□ 0.13
SS18-209ENST00000578595 MGLLQ99685 303 aa15.89■□□□□ 0.13
SS18-209ENST00000578595 PPIL3Q9H2H8 161 aaKnown RBP15.89■□□□□ 0.13
SS18-209ENST00000578595 TENM1Q9UKZ4 2725 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 MEIKINA0A087WXM9 373 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 MEGF11A6BM72 1044 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 FAM172BPA6NC97 362 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 FAM181BA6NEQ2 426 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 GEMIN2O14893 280 aaKnown RBP15.88■□□□□ 0.13
SS18-209ENST00000578595 CRTAPO75718 401 aaPredicted RBP15.88■□□□□ 0.13
SS18-209ENST00000578595 CSN2P05814 226 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 HKR1P10072 659 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms