RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 PSG2P11465 335 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 CSNK2A2P19784 350 aaPredicted RBP3.32□□□□□ -1.88
NUP88-213ENST00000576862 SERPINA2P20848 420 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 NTSP30990 170 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 MPIP34949 423 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 RPA3P35244 121 aaPredicted RBP3.32□□□□□ -1.88
NUP88-213ENST00000576862 DDOSTP39656 456 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 NBL1P41271 181 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 CCR2P41597 374 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 YAP1P46937 504 aaKnown RBP3.32□□□□□ -1.88
NUP88-213ENST00000576862 SRP9P49458 86 aaKnown RBP3.32□□□□□ -1.88
NUP88-213ENST00000576862 MAXP61244 160 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 RANP62826 216 aaKnown RBP3.32□□□□□ -1.88
NUP88-213ENST00000576862 LAGE3Q14657 143 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 MAD2L1BPQ15013 274 aaPredicted RBP3.32□□□□□ -1.88
NUP88-213ENST00000576862 PARP15Q460N3 678 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 TP53I3Q53FA7 332 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 ACTL10Q5JWF8 245 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 FAM199XQ6PEV8 388 aaPredicted RBP3.32□□□□□ -1.88
NUP88-213ENST00000576862 CD200R1LQ6Q8B3 271 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 CYHR1Q6ZMK1 362 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 FAM220AQ7Z4H9 259 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 WDFY1Q8IWB7 410 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 BBS7Q8IWZ6 715 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 CTAGE3PQ8IX95 158 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 NRMQ8IXM6 262 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 MS4A15Q8N5U1 240 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 C15orf54Q8N8G6 183 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 ITFG1Q8TB96 612 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 STMN2Q93045 179 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 IMP4Q96G21 291 aaKnown RBP3.32□□□□□ -1.88
NUP88-213ENST00000576862 TMEM101Q96IK0 257 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 APOL4Q9BPW4 351 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 TBL1YQ9BQ87 522 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 ZDHHC4Q9NPG8 344 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 ZNF331Q9NQX6 463 aaPredicted RBP3.32□□□□□ -1.88
NUP88-213ENST00000576862 RBM22Q9NW64 420 aaKnown RBP eCLIP3.32□□□□□ -1.88
NUP88-213ENST00000576862 TAS2R1Q9NYW7 299 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 FAM32AQ9Y421 112 aaKnown RBP3.32□□□□□ -1.88
NUP88-213ENST00000576862 CEP350Q5VT06 3117 aa3.32□□□□□ -1.88
NUP88-213ENST00000576862 TSC2P49815 1807 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 ZNF98A6NK75 572 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 SEC14L6B5MCN3 397 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 DISC1C4P0D8 188 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 H3BMQ9 156 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 KPNA3O00505 521 aaPredicted RBP3.31□□□□□ -1.88
NUP88-213ENST00000576862 FCN1O00602 326 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 SLC31A2O15432 143 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 CCL16O15467 120 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 TRAF3IP2O43734 574 aaPredicted RBP3.31□□□□□ -1.88
NUP88-213ENST00000576862 CLDN11O75508 207 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 DCTN3O75935 186 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 ATP5LO75964 103 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 SNAP29O95721 258 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 RAB36O95755 333 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 FAM107AO95990 144 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 CA1P00915 261 aaPredicted RBP3.31□□□□□ -1.88
NUP88-213ENST00000576862 BCHEP06276 602 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 TAC1P20366 129 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 LEPP41159 167 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 GSSP48637 474 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 CRISP1P54107 249 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 SLC18A1P54219 525 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 TAS2R39P59534 338 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 UBE2MP61081 183 aaKnown RBP3.31□□□□□ -1.88
NUP88-213ENST00000576862 SLC7A9P82251 487 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 GNA12Q03113 381 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 PRPSAP1Q14558 356 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 GNMTQ14749 295 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 GABRA6Q16445 453 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 TAL2Q16559 108 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 CEACAM21Q3KPI0 293 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 SOHLH1Q5JUK2 328 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 SPANXN3Q5MJ09 141 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 PPM1LQ5SGD2 360 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 SAXO2Q658L1 398 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 TMEM42Q69YG0 159 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 DHRS4L2Q6PKH6 230 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 C5orf46Q6UWT4 87 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 TIFABQ6ZNK6 161 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
NUP88-213ENST00000576862 SLC36A1Q7Z2H8 476 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 TMEM135Q86UB9 458 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 ZNF547Q8IVP9 402 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 TMEM252Q8N6L7 170 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 TPRX1Q8N7U7 411 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 OR1M1Q8NGA1 313 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 OR5L2Q8NGL0 311 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 OR5K2Q8NHB8 316 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 RNASE11Q8TAA1 199 aaKnown RBP3.31□□□□□ -1.88
NUP88-213ENST00000576862 LHFPL5Q8TAF8 219 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 WFDC5Q8TCV5 224 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 RASSF5Q8WWW0 418 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 SRSF12Q8WXF0 261 aaKnown RBP3.31□□□□□ -1.88
NUP88-213ENST00000576862 OR8D1Q8WZ84 308 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 SMIM19Q96E16 107 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 RILPQ96NA2 401 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 TRIB3Q96RU7 358 aa3.31□□□□□ -1.88
NUP88-213ENST00000576862 TSNAXQ99598 290 aaKnown RBP3.31□□□□□ -1.88
NUP88-213ENST00000576862 KIFC1Q9BW19 673 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms