RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 OR8B4Q96RC9 309 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 NRIP2Q9BQI9 281 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 IFT27Q9BW83 186 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 ANKRD60Q9BZ19 345 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 OR51I2Q9H344 312 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 GHITMQ9H3K2 345 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 ZNF556Q9HAH1 456 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 PCDHB16Q9NRJ7 776 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 DNAJC27Q9NZQ0 273 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 EXTL2Q9UBQ6 330 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 OR14J1Q9UGF5 321 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 LINC00527Q9UJ94 153 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 OAZ3Q9UMX2 235 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 SAMHD1Q9Y3Z3 626 aaKnown RBP4.62□□□□□ -1.67
SMG6-219ENST00000575663 LINC00312Q9Y6C7 94 aa4.62□□□□□ -1.67
SMG6-219ENST00000575663 DNAH10Q8IVF4 4471 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 TVP23AA6NH52 213 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 A6NHS1 94 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 OOSP1A8MZH6 123 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 K7N7A8 449 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 AP4M1O00189 453 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 TNFRSF11BO00300 401 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 FFAR1O14842 300 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 FGF16O43320 207 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 MPZL2O60487 215 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 MRPS14O60783 128 aaKnown RBP4.61□□□□□ -1.67
SMG6-219ENST00000575663 GADD45GO95257 159 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 IGHG2P01859 326 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 H1F0P07305 194 aaKnown RBP4.61□□□□□ -1.67
SMG6-219ENST00000575663 ELANEP08246 267 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 GSTT2P0CG29 244 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 GSTT2BP0CG30 244 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 IGHV4-30-4P0DP06 118 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 SPNP16150 400 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 ACKR3P25106 362 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 OMPP47874 163 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 ZNF121P58317 390 aaPredicted RBP4.61□□□□□ -1.67
SMG6-219ENST00000575663 CXCR4P61073 352 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 ESRRGP62508 458 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 BDH1Q02338 343 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 MEF2CQ06413 473 aaPredicted RBP4.61□□□□□ -1.67
SMG6-219ENST00000575663 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.61□□□□□ -1.67
SMG6-219ENST00000575663 FOXE3Q13461 319 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 HES1Q14469 280 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 EDDM3AQ14507 147 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 CEACAM21Q3KPI0 293 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 CLVS2Q5SYC1 327 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 TPTE2P1Q5T6R2 138 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 LPCAT4Q643R3 524 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 KDM4DQ6B0I6 523 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 KRT74Q7RTS7 529 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 VTCN1Q7Z7D3 282 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 AMIGO2Q86SJ2 522 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 TRAPPC6BQ86SZ2 158 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 ABHD12Q8N2K0 398 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 C5orf56Q8N8D9 126 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 SETD9Q8NE22 299 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 OR11H1Q8NG94 326 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 GIPC3Q8TF64 312 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 TRUB1Q8WWH5 349 aaKnown RBP4.61□□□□□ -1.67
SMG6-219ENST00000575663 CHCHD6Q9BRQ6 235 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 DGCR6LQ9BY27 220 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 FAM192AQ9GZU8 254 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 FGF23Q9GZV9 251 aaPredicted RBP4.61□□□□□ -1.67
SMG6-219ENST00000575663 OR52D1Q9H346 318 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 NIPAL2Q9H841 368 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 BRD7Q9NPI1 651 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 GMPR2Q9P2T1 348 aaKnown RBP4.61□□□□□ -1.67
SMG6-219ENST00000575663 HHLA2Q9UM44 414 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 SLC22A13Q9Y226 551 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 KIAA1109Q2LD37 5005 aa4.61□□□□□ -1.67
SMG6-219ENST00000575663 MAGEA13PA6NCF6 341 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 A8MZ25 164 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 PRR23D1E9PI22 279 aaPredicted RBP4.6□□□□□ -1.67
SMG6-219ENST00000575663 J3QT63 122 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 TOR1AO14656 332 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 EI24O14681 340 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 OVOL1O14753 267 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 CIDEAO60543 219 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 CLN5O75503 358 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 CCNB2O95067 398 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 TNFAIP8O95379 198 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 CRYZL1O95825 349 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 PRR23D2P0DMB1 279 aaPredicted RBP4.6□□□□□ -1.67
SMG6-219ENST00000575663 CLUP10909 449 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 PSKH1P11801 424 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 VDAC1P21796 283 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 FMO3P31513 532 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 PYCR1P32322 319 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 CAPGP40121 348 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 GPR12P47775 334 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 PCP4P48539 62 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 MTNR1BP49286 362 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 AQP4P55087 323 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 ADARB1P78563 741 aaKnown RBP4.6□□□□□ -1.67
SMG6-219ENST00000575663 ZNF616Q08AN1 781 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 GPR50Q13585 617 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 RBM39Q14498 530 aaKnown RBP4.6□□□□□ -1.67
SMG6-219ENST00000575663 LRRC36Q1X8D7 754 aa4.6□□□□□ -1.67
SMG6-219ENST00000575663 HLA-DRB5Q30154 266 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms