RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 PRSS8Q16651 343 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 THEM4Q5T1C6 240 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 RTL6Q6ICC9 239 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 LRP11Q86VZ4 500 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 MRPL41Q8IXM3 137 aaKnown RBP12.5□□□□□ -0.41
SMG6-215ENST00000574501 TMEM37Q8WXS4 190 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 B3GAT1Q9P2W7 334 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 PIGLQ9Y2B2 252 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 MTCH2Q9Y6C9 303 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 MED12Q93074 2177 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 CNTRLQ7Z7A1 2325 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 B4DGG1 531 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 TNFRSF10CO14798 259 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 GZMHP20718 246 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 ZNF133P52736 654 aaPredicted RBP12.5□□□□□ -0.41
SMG6-215ENST00000574501 DCAF7P61962 342 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 RAB35Q15286 201 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 FAM185AQ8N0U4 392 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 NOXO1Q8NFA2 376 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 OR13H1Q8NG92 308 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 DNASE2BQ8WZ79 361 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 SOHLH2Q9NX45 425 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 CEP290O15078 2479 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 C3orf85A0A1B0GTC6 90 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 ADAM20O43506 726 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 CA11O75493 328 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 TNFP01375 233 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 PRSS12P56730 875 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 ADIRFQ15847 76 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 ZNF100Q8IYN0 542 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 SLC22A18ASQ8N1D0 253 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 FAM131CQ96AQ9 280 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 TMEM208Q9BTX3 173 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 VSIRQ9H7M9 311 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 GOLT1BQ9Y3E0 138 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 TRDCB7Z8K6 153 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 H3BP45 60 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 BCL2P10415 239 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 FGF5P12034 268 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 AADACP22760 399 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 BTNL3Q6UXE8 466 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 C16orf82Q7Z2V1 217 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 YAF2Q8IY57 180 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 OR5L2Q8NGL0 311 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 OR10G4Q8NGN3 311 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 TMEM234Q8WY98 164 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 RPP25Q9BUL9 199 aaKnown RBP12.49□□□□□ -0.41
SMG6-215ENST00000574501 GPR173Q9NS66 373 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 CBY1Q9Y3M2 126 aa12.49□□□□□ -0.41
SMG6-215ENST00000574501 KIR2DS5A0A0G2JLQ3 304 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 A0A0G2JNG1 304 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 A0A1W2PQF6 199 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 KIR2DS3K7RE56 304 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 SCGB1D1O95968 90 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 MTCP1P56278 107 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 FOXL2P58012 376 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 ERVFC1-1P60608 527 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 GNB2P62879 340 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 KIR2DS5Q14953 304 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 C1orf53Q5VUE5 145 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 NCR3LG1Q68D85 454 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 ZNF787Q6DD87 383 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 SLC25A24Q6NUK1 477 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 SLC25A26Q70HW3 274 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 ZNF695Q8IW36 515 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 IL22RA1Q8N6P7 574 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 THAP3Q8WTV1 239 aaPredicted RBP12.48□□□□□ -0.41
SMG6-215ENST00000574501 NAT6Q93015 286 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 CISD1Q9NZ45 108 aaKnown RBP12.48□□□□□ -0.41
SMG6-215ENST00000574501 KLHL13Q9P2N7 655 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 TRANK1O15050 2925 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 LIPT2A6NK58 231 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 CEBPZOSA8MTT3 80 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 MPPED1O15442 326 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 CHST1O43916 411 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 CDS2O95674 445 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 THEGLP0DJG4 465 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 HOXB2P14652 356 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 NTSR1P30989 418 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 RPL29P47914 159 aaKnown RBP12.48□□□□□ -0.41
SMG6-215ENST00000574501 IDH3GP51553 393 aaPredicted RBP12.48□□□□□ -0.41
SMG6-215ENST00000574501 ELLP55199 621 aaPredicted RBP12.48□□□□□ -0.41
SMG6-215ENST00000574501 MRPS34P82930 218 aaKnown RBP12.48□□□□□ -0.41
SMG6-215ENST00000574501 HERPUD1Q15011 391 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 NSDHLQ15738 373 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 SSX7Q7RTT5 188 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 UEVLDQ8IX04 471 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 PCGF1Q9BSM1 259 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 RSG1Q9BU20 258 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 ANGPTL4Q9BY76 406 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 ZNF160Q9HCG1 818 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 RPRMQ9NS64 109 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 FUT9Q9Y231 359 aa12.48□□□□□ -0.41
SMG6-215ENST00000574501 UBE2J1Q9Y385 318 aaPredicted RBP12.48□□□□□ -0.41
SMG6-215ENST00000574501 CCDC85CA6NKD9 419 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 IGHG1P01857 330 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 PFN1P07737 140 aaKnown RBP12.47□□□□□ -0.41
SMG6-215ENST00000574501 RAB4AP20338 218 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 TAS2R30P59541 319 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 HERV-K104P61576 105 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms