RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CTDSPLO15194 276 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 F12P00748 615 aaPredicted RBP20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 PPIAL4FP0DN26 164 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 PRDX2P32119 198 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 PRSS3P35030 304 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 INPP1P49441 399 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 EFNA4P52798 201 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 HACD4Q5VWC8 232 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 BPIFB2Q8N4F0 458 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 OR52I2Q8NH67 350 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 DLL4Q9NR61 685 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 PPIAL4AQ9Y536 164 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 MEIS3P1A6NDR6 274 aa20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 LGALS8O00214 317 aa20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 CD3GP09693 182 aa20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 GABRA2P47869 451 aa20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 MRPS11P82912 194 aaKnown RBP20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 STUMQ69YW2 141 aa20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 ANGPTL6Q8NI99 470 aa20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 SMIM4Q8WVI0 70 aa20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 DPCDQ9BVM2 203 aaPredicted RBP20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 SPACA1Q9HBV2 294 aa20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 AK3Q9UIJ7 227 aa20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 ZNF222Q9UK12 451 aa20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 USF3Q68DE3 2245 aa20.12■□□□□ 0.81
ATPAF1-213ENST00000574428 GABARAPH6UMI1 98 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 GYPAP02724 150 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 MELTFP08582 738 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 MUC1P15941 1255 aaPredicted RBP20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 COL10A1Q03692 680 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 ZMYND11Q15326 602 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 PAN3Q58A45 887 aaKnown RBP20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 ZNF57Q68EA5 555 aaPredicted RBP20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 NEK7Q8TDX7 302 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 FCAMRQ8WWV6 532 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 PLEKHA6Q9Y2H5 1048 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 SERPINE3A8MV23 424 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 LYRM1O43325 122 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 GNG2P59768 71 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 ARFRP1Q13795 201 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 ARL6IP1Q15041 203 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 HDHD3Q9BSH5 251 aaPredicted RBP20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 PPA2Q9H2U2 334 aa20.11■□□□□ 0.81
ATPAF1-213ENST00000574428 FASNP49327 2511 aaKnown RBP20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 TRAV38-1A0A0B4J264 116 aa20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 MCRIP1C9JLW8 97 aa20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 GSTZ1O43708 216 aaPredicted RBP20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 SSX5O60225 188 aa20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 PSPNO60542 156 aa20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 IGHV4-39P01824 125 aa20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 MRPS10P82664 201 aaKnown RBP20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 CARTPTQ16568 116 aa20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 PNLIPRP3Q17RR3 467 aa20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 ZNF554Q86TJ5 538 aa20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 CHST6Q9GZX3 395 aa20.1■□□□□ 0.81
ATPAF1-213ENST00000574428 H3BUI4 141 aa20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 FCER2P06734 321 aa20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 LPLP06858 475 aa20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 AMY2BP19961 511 aa20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 LMO1P25800 156 aa20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 BTG1P62324 171 aa20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 TRAPPC6BQ86SZ2 158 aa20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 ASCC1Q8N9N2 400 aaKnown RBP20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 GPX8Q8TED1 209 aa20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 PPP1R14BQ96C90 147 aa20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 CCL13Q99616 98 aa20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 KLK11Q9UBX7 282 aa20.09■□□□□ 0.81
ATPAF1-213ENST00000574428 TMEM82A0PJX8 343 aa20.08■□□□□ 0.81
ATPAF1-213ENST00000574428 AVPI1Q5T686 147 aa20.08■□□□□ 0.81
ATPAF1-213ENST00000574428 MZT2BQ6NZ67 158 aa20.08■□□□□ 0.81
ATPAF1-213ENST00000574428 NEURL2Q9BR09 285 aa20.08■□□□□ 0.81
ATPAF1-213ENST00000574428 SCPEP1Q9HB40 452 aa20.08■□□□□ 0.81
ATPAF1-213ENST00000574428 A0A1B0GW55 424 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 DUX4L2P0CJ85 424 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 DUX4L3P0CJ86 424 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 DUX4L4P0CJ87 422 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 DUX4L5P0CJ88 424 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 DUX4L6P0CJ89 424 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 DUX4L7P0CJ90 424 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 ATXN7L3Q14CW9 347 aaPredicted RBP20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 DUX4L9Q6RFH8 374 aaPredicted RBP20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 C17orf107Q6ZR85 190 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 DNM1P46Q6ZS02 220 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 ENKURQ8TC29 256 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 MMP28Q9H239 520 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 CHODLQ9H9P2 273 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 TMEM165Q9HC07 324 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 ING3Q9NXR8 418 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 DUX4Q9UBX2 424 aa20.08■□□□□ 0.8
ATPAF1-213ENST00000574428 PPIHO43447 177 aaKnown RBP20.07■□□□□ 0.8
ATPAF1-213ENST00000574428 SELLP14151 372 aa20.07■□□□□ 0.8
ATPAF1-213ENST00000574428 RBM39Q14498 530 aaKnown RBP20.07■□□□□ 0.8
ATPAF1-213ENST00000574428 PEG10Q86TG7 708 aaKnown RBP20.07■□□□□ 0.8
ATPAF1-213ENST00000574428 FAM216BQ8N7L0 139 aa20.07■□□□□ 0.8
ATPAF1-213ENST00000574428 ZNRF1Q8ND25 227 aa20.07■□□□□ 0.8
ATPAF1-213ENST00000574428 OR4S1Q8NGB4 309 aa20.07■□□□□ 0.8
ATPAF1-213ENST00000574428 GAFA1Q96PS6 74 aa20.07■□□□□ 0.8
ATPAF1-213ENST00000574428 CMSS1Q9BQ75 279 aaKnown RBP20.07■□□□□ 0.8
ATPAF1-213ENST00000574428 SEBOXQ9HB31 216 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms