RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 UPRTQ96BW1 309 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 OR8B2Q96RD0 313 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 CLN8Q9UBY8 286 aa8.71□□□□□ -1.02
SMG6-213ENST00000573166 SMCO3A2RU48 225 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 BTBD17A6NE02 478 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 ALX3O95076 343 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 OR8U9P0C7N5 309 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 PI3P19957 117 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 CAV2P51636 162 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 LRRTM1Q86UE6 522 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 COMMD7Q86VX2 200 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 OR8U1Q8NH10 309 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 CMTM3Q96MX0 182 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 AIFM2Q9BRQ8 373 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 LPAR2Q9HBW0 351 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 DHRS7CA6NNS2 312 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 NFYAP23511 347 aaPredicted RBP8.7□□□□□ -1.02
SMG6-213ENST00000573166 ASAH1Q13510 395 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 Q5BKY6 102 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 OR10V1Q8NGI7 309 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 GIMAP1Q8WWP7 306 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 ZNF665Q9H7R5 613 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 PLEKHF2Q9H8W4 249 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 NPTNQ9Y639 398 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 ARPC5O15511 151 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 FSTP19883 344 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 ECI1P42126 302 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 OR2B11Q5JQS5 317 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 OR6C3Q9NZP0 311 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 NPAP1Q9NZP6 1156 aa8.7□□□□□ -1.02
SMG6-213ENST00000573166 ATG2AQ2TAZ0 1938 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 TBPP20226 339 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 ETV6P41212 452 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 OR3A1P47881 315 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 PSG7Q13046 419 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 UBE2V2Q15819 145 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 AVPI1Q5T686 147 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 MOB1BQ7L9L4 216 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 SPICQ8N5J4 248 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 ZFYVE26Q68DK2 2539 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 A0A087WV48 116 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 CEBPZOSA8MTT3 80 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 DEFB108AA8MXU0 73 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 SYNGR1O43759 233 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 IGHV3-13P01766 116 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 IGHV3-7P01780 117 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 F2RL1P55085 397 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 DLX5P56178 289 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 RPS27AP62979 156 aaKnown RBP8.69□□□□□ -1.02
SMG6-213ENST00000573166 BAMBIQ13145 260 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 MPV17LQ2QL34 196 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 PXDC1Q5TGL8 231 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 RBMS3Q6XE24 437 aaKnown RBP8.69□□□□□ -1.02
SMG6-213ENST00000573166 MRPL41Q8IXM3 137 aaKnown RBP8.69□□□□□ -1.02
SMG6-213ENST00000573166 SEH1LQ96EE3 360 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 SOX7Q9BT81 388 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 C1QTNF5Q9BXJ0 243 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 CNTNAP3Q9BZ76 1288 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 ZFP57Q9NU63 452 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 IL19Q9UHD0 177 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 FLVCR2Q9UPI3 526 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 WIPI2Q9Y4P8 454 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 A0A1W2PP11 408 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 PIN1P1O15428 100 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 COX7A1P24310 79 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 S100A2P29034 98 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 GZMKP49863 264 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 MMP15P51511 669 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 ZNF709Q8N972 641 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 WDR13Q9H1Z4 485 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 GAL3ST2Q9H3Q3 398 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 LANCL1O43813 399 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 DKK1O94907 266 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 PRDX2P32119 198 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 MDH2P40926 338 aaKnown RBP8.69□□□□□ -1.02
SMG6-213ENST00000573166 ZNF474Q6S9Z5 364 aaPredicted RBP8.69□□□□□ -1.02
SMG6-213ENST00000573166 WFIKKN1Q96NZ8 548 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 CCL13Q99616 98 aa8.69□□□□□ -1.02
SMG6-213ENST00000573166 A0A0A6YYJ9 748 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 TRAV39A0A0B4J263 110 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 hCG_38984A0A1B0GV85 526 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 LOC390937A0A1W2PQ73 354 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 ZBTB25P24278 435 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 GNG10P50151 68 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 C4orf17Q53FE4 359 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 C9orf152Q5JTZ5 239 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 ELP2Q6IA86 826 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 BTNL3Q6UXE8 466 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 OR4C16Q8NGL9 310 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 MARCH1Q8TCQ1 289 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 PECRQ9BY49 303 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 DLL4Q9NR61 685 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 IGHV3-43A0A0B4J1X8 118 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 IGHV3-43DP0DP04 118 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 NAT1P18440 290 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 SNCAP37840 140 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 SRPXP78539 464 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 TMEM104Q8NE00 496 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 ABHD1Q96SE0 405 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 REPIN1Q9BWE0 567 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms