RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 TREML4Q6UXN2 200 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 OR4M1Q8NGD0 313 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 CLDND2Q8NHS1 167 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 CCL17Q92583 94 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 URM1Q9BTM9 101 aaKnown RBP11.43□□□□□ -0.58
RPAIN-209ENST00000571558 ATG5Q9H1Y0 275 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 IFT22Q9H7X7 185 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 SEBOXQ9HB31 216 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-209ENST00000571558 VWFP04275 2813 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 A0A0A6YYH2 397 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A10PA6NDY2 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A18PA6NE21 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A16PA6NEW6 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A20PA6NIJ5 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 A6NJ64 397 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A8PA6NJQ4 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A7PA6NKC0 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A22PA8MWA6 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A12PA8MX19 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A5PA8MXJ8 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A23PA8MXZ1 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 SOCS1O15524 211 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FSTL3O95633 263 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 KNG1P01042 644 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 CHRM2P08172 466 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A15PP0C7V4 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A13PP0C7W8 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A14PP0C7W9 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A24PP0C7X0 464 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 IRF2P14316 349 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 CPT2P23786 658 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 S100A5P33763 92 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 TMEM50BP56557 158 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 GMFBP60983 142 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 IL13RA2Q14627 380 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 TAF9Q16594 264 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 HFEQ30201 348 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 SMIM21Q3B7S5 101 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAHD2BQ6P2I3 314 aaPredicted RBP11.42□□□□□ -0.58
RPAIN-209ENST00000571558 Q6P435 159 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 LINC00596Q86U02 117 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 RTN4RL2Q86UN3 420 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 C1orf87Q8N0U7 546 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 MFSD4AQ8N468 514 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 S100A16Q96FQ6 103 aaKnown RBP11.42□□□□□ -0.58
RPAIN-209ENST00000571558 FAHD2AQ96GK7 314 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 GAL3ST1Q99999 423 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 NUDT16L1Q9BRJ7 211 aaKnown RBP11.42□□□□□ -0.58
RPAIN-209ENST00000571558 AKIP1Q9NQ31 210 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 ZNF222Q9UK12 451 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 ADAM30Q9UKF2 790 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 V9GYH0 126 aa11.42□□□□□ -0.58
RPAIN-209ENST00000571558 IGKV1D-17A0A075B6S4 117 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 METTL21EPA6NDL7 271 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 FAM25AB3EWG3 89 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 FAM25CB3EWG5 89 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 FAM25GB3EWG6 89 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 XRCC3O43542 346 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 HKR1P10072 659 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 PSG2P11465 335 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 DUSP1P28562 367 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 MNDAP41218 407 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 PITPNBP48739 271 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 VEGFCP49767 419 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 SNU13P55769 128 aaKnown RBP11.41□□□□□ -0.58
RPAIN-209ENST00000571558 FAM189A2Q15884 450 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 MPV17LQ2QL34 196 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 PLAC9Q5JTB6 97 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 STUMQ69YW2 141 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 RAB12Q6IQ22 244 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 DTX3Q8N9I9 347 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 BOLLQ8N9W6 283 aaKnown RBP11.41□□□□□ -0.58
RPAIN-209ENST00000571558 C19orf18Q8NEA5 215 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 OR56B1Q8NGI3 324 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 OR10R2Q8NGX6 335 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 ANGPTL6Q8NI99 470 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 DIRAS2Q96HU8 199 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 CYYR1Q96J86 154 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 RCC2Q9P258 522 aaKnown RBP11.41□□□□□ -0.58
RPAIN-209ENST00000571558 NLKQ9UBE8 527 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 EXTL2Q9UBQ6 330 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 WIPI2Q9Y4P8 454 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 TRRAPQ9Y4A5 3859 aa11.41□□□□□ -0.58
RPAIN-209ENST00000571558 IGHV3OR15-7A0A075B7D8 119 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 OOEPA6NGQ2 149 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 OR2AT4A6NND4 320 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 J3QLI3 93 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 LGALS8O00214 317 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 TNFRSF13BO14836 293 aaPredicted RBP11.4□□□□□ -0.58
RPAIN-209ENST00000571558 SCGNO76038 276 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 ZNF205O95201 554 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 MUC1P15941 1255 aaPredicted RBP11.4□□□□□ -0.58
RPAIN-209ENST00000571558 AMY2BP19961 511 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 GABRR1P24046 479 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 CHATP28329 748 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 PDCD1Q15116 288 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 ZMYND11Q15326 602 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 SFRP4Q6FHJ7 346 aaPredicted RBP11.4□□□□□ -0.58
RPAIN-209ENST00000571558 NANPQ8TBE9 248 aa11.4□□□□□ -0.58
RPAIN-209ENST00000571558 HSF4Q9ULV5 492 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms