RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 KCNJ3P48549 501 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 INPP1P49441 399 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 CEBPDP49716 269 aaPredicted RBP5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 EDDM3BP56851 147 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 TAS2R20P59543 309 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 KRTAP10-9P60411 292 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 MRPS10P82664 201 aaKnown RBP5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 HOXA4Q00056 320 aaPredicted RBP5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 COL10A1Q03692 680 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 PLA2G7Q13093 441 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 MADCAM1Q13477 382 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 EDDM3AQ14507 147 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 ATXN7L3Q14CW9 347 aaPredicted RBP5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 GRK1Q15835 563 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 CLEC12BQ2HXU8 276 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 TMEM155Q4W5P6 130 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 ESCO2Q56NI9 601 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 PYDC2Q56P42 97 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 Q5PR19 223 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 TRIQKQ629K1 86 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 PYHIN1Q6K0P9 492 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 LINC00299Q6ZSB3 139 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 Q6ZTK2 550 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 GDPD3Q7L5L3 318 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 TGIF2LYQ8IUE0 185 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 FAM216BQ8N7L0 139 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 Q8NFD4 153 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR5T2Q8NGG2 359 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 SETD6Q8TBK2 473 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 IGFBPL1Q8WX77 278 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 ST8SIA4Q92187 359 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 RAB39BQ96DA2 213 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 SEH1LQ96EE3 360 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 CMSS1Q9BQ75 279 aaKnown RBP5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 DPCDQ9BVM2 203 aaPredicted RBP5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 BPESC1Q9GZL8 116 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 DNTTIP1Q9H147 329 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 PPA2Q9H2U2 334 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 MIXL1Q9H2W2 232 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 IFT22Q9H7X7 185 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 C12orf4Q9NQ89 552 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 IFT46Q9NQC8 304 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 ING3Q9NXR8 418 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 ETAA1Q9NY74 926 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 MIOXQ9UGB7 285 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 LRRK2Q5S007 2527 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 ADGRG4Q8IZF6 3080 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 IGKV1D-17A0A075B6S4 117 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 A0A0A6YYD4 124 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 A0A0G2JMP0 313 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 A0A0X1KG70 313 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 TMEM30CPA0ZSE6 113 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 UBE2QL1A1L167 161 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 CEACAM18A8MTB9 384 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 RAB27BO00194 218 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 SLC33A1O00400 549 aaPredicted RBP5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 SIGLEC5O15389 551 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 SOCS1O15524 211 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 FSTL3O95633 263 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 GLAP06280 429 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 SLC25A16P16260 332 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 GNB3P16520 340 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 GLP1RP43220 463 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 ACTBP60709 375 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 ACTG1P63261 375 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF45Q02386 682 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF846Q147U1 533 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 PDCD1Q15116 288 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 PNLIPRP3Q17RR3 467 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 MOGAT2Q3SYC2 334 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 CDNFQ49AH0 187 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 RNASE12Q5GAN4 147 aaKnown RBP5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 METAP1DQ6UB28 335 aaPredicted RBP5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 MOB1BQ7L9L4 216 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 C6orf201Q7Z4U5 140 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 TRAPPC6BQ86SZ2 158 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 MRPL41Q8IXM3 137 aaKnown RBP5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR8H2Q8N162 312 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 FAM89BQ8N5H3 189 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 CD177Q8N6Q3 437 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 DTX3Q8N9I9 347 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 SUMF2Q8NBJ7 301 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR4M2Q8NGB6 313 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR5D13Q8NGL4 314 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 ANGPTL6Q8NI99 470 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 H1FXQ92522 213 aaKnown RBP5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 MBD6Q96DN6 1003 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 NEIL1Q96FI4 390 aaPredicted RBP5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 SDSLQ96GA7 329 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 ARHGAP5-AS1Q96IT6 56 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 SNX22Q96L94 193 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 GAFA1Q96PS6 74 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 CCL13Q99616 98 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 TMEM246Q9BRR3 403 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 PECRQ9BY49 303 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 CHST6Q9GZX3 395 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 FAM234AQ9H0X4 552 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZMAT3Q9HA38 289 aaKnown RBP5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 RCC2Q9P258 522 aaKnown RBP5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 SLC25A10Q9UBX3 287 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms