RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 UTS2BQ765I0 119 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 OR5D18Q8NGL1 313 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 OR13C3Q8NGS6 347 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 FOXRED1Q96CU9 486 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 MALSU1Q96EH3 234 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 OR5M11Q96RB7 305 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 MMP28Q9H239 520 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 HMG20AQ9NP66 347 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 RAB18Q9NP72 206 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 CHCHD3Q9NX63 227 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 EXOSC1Q9Y3B2 195 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 LINC00312Q9Y6C7 94 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 SESN1Q9Y6P5 492 aa11.11□□□□□ -0.63
GTF3C1-211ENST00000569653 E9PI62 339 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 OR2H2O95918 312 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 OCM2P0CE71 109 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 OCMP0CE72 109 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 LIMS3P0CW19 117 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 LIMS4P0CW20 117 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 PRKACAP17612 351 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 GABRR1P24046 479 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 CD24P25063 80 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 RBP2P50120 134 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 MTCP1P56278 107 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 P2RX3P56373 397 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 PDZK1IP1Q13113 114 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 NSUN5P1Q3KNT7 163 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 Q6P435 159 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 OR5AK2Q8NH90 309 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 RPS4Y2Q8TD47 263 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 SPSB1Q96BD6 273 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 COQ2Q96H96 371 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 OPALINQ96PE5 141 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 CITED2Q99967 270 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 TMEM133Q9H2Q1 129 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 NEK6Q9HC98 313 aa11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 DIMT1Q9UNQ2 313 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-211ENST00000569653 hADV38S2A0JD32 116 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 MGST3O14880 152 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 FBXO24O75426 580 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 KDM4BO94953 1096 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 ZFPL1O95159 310 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 PRKACBP22694 351 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 GLIPR1P48060 266 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 ETV1P50549 477 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 ATP1B3P54709 279 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 ZP1P60852 638 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 CCDC58Q4VC31 144 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 OXLD1Q5BKU9 147 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 TCTEX1D4Q5JR98 221 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 LHFPL2Q6ZUX7 228 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 Q8IYB0 196 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 OR13C9Q8NGT0 318 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 TMEM80Q96HE8 168 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 OCSTAMPQ9BR26 566 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 CNOT2Q9NZN8 540 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 GSTK1Q9Y2Q3 226 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 PCDHGB5Q9Y5G0 923 aa11.09□□□□□ -0.63
GTF3C1-211ENST00000569653 EFCAB10A6NFE3 127 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 CYB5AP00167 134 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 IGLV1-47P01700 117 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 ERP29P30040 261 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 VHLP40337 213 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 CDK5R1Q15078 307 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 SPIN3Q5JUX0 258 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 MINOS1Q5TGZ0 78 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 RPL22L1Q6P5R6 122 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 Q6ZPA2 131 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 TSEN15Q8WW01 171 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 RGP1Q92546 391 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 CLEC7AQ9BXN2 247 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 PPIL3Q9H2H8 161 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 VCX3BQ9H321 246 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 ZNF286AQ9HBT8 521 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 DHDHQ9UQ10 334 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 MINOS1-NBL1R4GNA1 71 aa11.08□□□□□ -0.64
GTF3C1-211ENST00000569653 SH2D7A6NKC9 451 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 F2RL2O00254 374 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 MT-ND2P03891 347 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 AMY1AP04745 511 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 AMY2AP04746 511 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 LMO1P25800 156 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 AESQ08117 197 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 ST3GAL4Q11206 333 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 C17orf58Q2M2W7 97 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 OR2G6Q5TZ20 316 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 C10orf99Q6UWK7 81 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 SERPINA12Q8IW75 414 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 OR5D14Q8NGL3 314 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 OR52N1Q8NH53 320 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 NDNFQ8TB73 568 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 CORO2AQ92828 525 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 PDCD1LG2Q9BQ51 273 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 ANKRD60Q9BZ19 345 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 ZCCHC4Q9H5U6 513 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 ABCB10Q9NRK6 738 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 ZNF581Q9P0T4 197 aa11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 UBE2J1Q9Y385 318 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-211ENST00000569653 ODAMA1E959 279 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms