RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CDRT1O95170 752 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 HTR3BO95264 441 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 RBP4P02753 201 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 CSTBP04080 98 aaKnown RBP11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 CSN2P05814 226 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 FBP1P09467 338 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 HKR1P10072 659 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 SAA4P35542 130 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 COMPP49747 757 aaPredicted RBP11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 IL13RA2Q14627 380 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 UNQ9370/PRO34162Q6UXP9 181 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 C12orf54Q6X4T0 127 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 PRSS48Q7RTY5 328 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 LDLRAD3Q86YD5 345 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 CDH26Q8IXH8 852 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 TPRX1Q8N7U7 411 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 OR10K1Q8NGX5 313 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 SSMEM1Q8WWF3 244 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 ZNF714Q96N38 554 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 NKX3-1Q99801 234 aaPredicted RBP11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 CCDC90BQ9GZT6 254 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 PCDHB16Q9NRJ7 776 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 IL36GQ9NZH8 169 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 BLOC1S6Q9UL45 172 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 LINC00312Q9Y6C7 94 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 MAGEA13PA6NCF6 341 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 SLC33A1O00400 549 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 ZNF780AO75290 641 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 PAHP00439 452 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 MAS1P04201 325 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 IER3P46695 156 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 P2RX3P56373 397 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 GPR176Q14439 515 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 MIDNQ504T8 468 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 ACSM3Q53FZ2 586 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 TCF23Q7RTU1 214 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 PNKDQ8N490 385 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 UFD1Q92890 307 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 PPA2Q9H2U2 334 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 DPAGT1Q9H3H5 408 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 ISYNA1Q9NPH2 558 aa11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 UBE2J1Q9Y385 318 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-218ENST00000569569 MEX3AA1L020 520 aaKnown RBP11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 MEGF11A6BM72 1044 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 IGHV1-8P0DP01 117 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 SERPINA2P20848 420 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 LGALS4P56470 323 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 AESQ08117 197 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 FOXL1Q12952 345 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 NHLRC3Q5JS37 347 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 KRBOX4Q5JUW0 171 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 ZNF782Q6ZMW2 699 aaPredicted RBP11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 TRAPPC6BQ86SZ2 158 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 OSR2Q8N2R0 312 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 JAGN1Q8N5M9 183 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 OR13D1Q8NGV5 346 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 CORO2AQ92828 525 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 TMED9Q9BVK6 235 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 CHIAQ9BZP6 476 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 Q9H521 79 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 TNFRSF19Q9NS68 423 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 ZNRD1Q9P1U0 126 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 ST3GAL6Q9Y274 331 aa11.26□□□□□ -0.61
HERPUD1-218ENST00000569569 TRGV10A0A0A0MS01 117 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 TRAV24A0A0B4J272 114 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 DENRO43583 198 aaKnown RBP11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 IGHV4-59P01825 116 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 CRYBA1P05813 215 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 HSMCR30P0CW71 290 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 GTF2F2P13984 249 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 COX7A1P24310 79 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 GLIPR1P48060 266 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 MLLT11Q13015 90 aaPredicted RBP11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 TPBGQ13641 420 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 PIGYQ3MUY2 71 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 SLC22A6Q4U2R8 563 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 PAN3Q58A45 887 aaKnown RBP11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 LIPKQ5VXJ0 399 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 LINC00596Q86U02 117 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 NKAIN3Q8N8D7 197 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 BEND2Q8NDZ0 799 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 MUL1Q969V5 352 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 COQ2Q96H96 371 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 BARHL1Q9BZE3 327 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 MEGF9Q9H1U4 602 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 TCF7L1Q9HCS4 588 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 TAS2R3Q9NYW6 316 aa11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 MRPS28Q9Y2Q9 187 aaKnown RBP11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 RRP15Q9Y3B9 282 aaKnown RBP11.25□□□□□ -0.61
HERPUD1-218ENST00000569569 ODAMA1E959 279 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 FAM181BA6NEQ2 426 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 SC5DO75845 299 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 CPEP16870 476 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 KCNJ3P48549 501 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 RBM11P57052 281 aaKnown RBP11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 RPL15P61313 204 aaKnown RBP11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 INSL4Q14641 139 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 ATXN7L3Q14CW9 347 aaPredicted RBP11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 TRAM1Q15629 374 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 MPV17LQ2QL34 196 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms