RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 ZDHHC16Q969W1 377 aa10.53□□□□□ -0.72
CDT1-203ENST00000569140 FAM46BQ96A09 425 aa10.53□□□□□ -0.72
CDT1-203ENST00000569140 FOXRED1Q96CU9 486 aaPredicted RBP10.53□□□□□ -0.72
CDT1-203ENST00000569140 UQCC2Q9BRT2 126 aa10.53□□□□□ -0.72
CDT1-203ENST00000569140 PPIL3Q9H2H8 161 aaKnown RBP10.53□□□□□ -0.72
CDT1-203ENST00000569140 BANF2Q9H503 90 aa10.53□□□□□ -0.72
CDT1-203ENST00000569140 METTL8Q9H825 291 aaKnown RBP10.53□□□□□ -0.72
CDT1-203ENST00000569140 NDUFB11Q9NX14 153 aa10.53□□□□□ -0.72
CDT1-203ENST00000569140 IL36GQ9NZH8 169 aa10.53□□□□□ -0.72
CDT1-203ENST00000569140 SF3B6Q9Y3B4 125 aaKnown RBP10.53□□□□□ -0.72
CDT1-203ENST00000569140 SOX21Q9Y651 276 aaPredicted RBP10.53□□□□□ -0.72
CDT1-203ENST00000569140 NF1P21359 2839 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 GEMIN2O14893 280 aaKnown RBP10.52□□□□□ -0.73
CDT1-203ENST00000569140 SC5DO75845 299 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 TNFAIP8O95379 198 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 COX7A1P24310 79 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 GP2P55259 537 aaKnown RBP10.52□□□□□ -0.73
CDT1-203ENST00000569140 P2RX3P56373 397 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 GUCA2AQ02747 115 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 AESQ08117 197 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 KRBOX4Q5JUW0 171 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 NCR3LG1Q68D85 454 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 ASCL4Q6XD76 172 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 ZNF782Q6ZMW2 699 aaPredicted RBP10.52□□□□□ -0.73
CDT1-203ENST00000569140 CDH26Q8IXH8 852 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 Q8N7P7 452 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 DMRTB1Q96MA1 342 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 ZNF714Q96N38 554 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 DUX5Q96PT3 197 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 JMJD8Q96S16 334 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 SELENOIQ9C0D9 397 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 VCX3AQ9NNX9 186 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 AK6Q9Y3D8 172 aaKnown RBP10.52□□□□□ -0.73
CDT1-203ENST00000569140 WNK2Q9Y3S1 2297 aa10.52□□□□□ -0.73
CDT1-203ENST00000569140 C2CD3Q4AC94 2353 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 TRGV10A0A0A0MS01 117 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 RNF212BA8MTL3 300 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 MPIG6BO95866 241 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 ZNF728P0DKX0 622 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 MGMTP16455 207 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 HTR2CP28335 458 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 GLP1RP43220 463 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 GLIPR1P48060 266 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 ERVFRD-1P60508 538 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 BAMBIQ13145 260 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 P2RY14Q15391 338 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 TAF9Q16594 264 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 C22orf42Q6IC83 251 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 LINC00596Q86U02 117 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 PNKDQ8N490 385 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 OR51T1Q8NGJ9 327 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 DPCDQ9BVM2 203 aaPredicted RBP10.51□□□□□ -0.73
CDT1-203ENST00000569140 CST11Q9H112 138 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 KCNK15Q9H427 330 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 SEBOXQ9HB31 216 aaPredicted RBP10.51□□□□□ -0.73
CDT1-203ENST00000569140 TNFRSF19Q9NS68 423 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 ZNF581Q9P0T4 197 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 FAM96BQ9Y3D0 163 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 ZFHX3Q15911 3703 aa10.51□□□□□ -0.73
CDT1-203ENST00000569140 NIPBLQ6KC79 2804 aaeCLIP10.51□□□□□ -0.73
CDT1-203ENST00000569140 TRAV24A0A0B4J272 114 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 RNASEK-C17orf49H0YIS7 233 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 PDCD5O14737 125 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 NPFFO15130 113 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 VENTXO95231 258 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 PAHP00439 452 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 PRTN3P24158 256 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 LMO1P25800 156 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 HILS1P60008 231 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 MEF2CQ06413 473 aaPredicted RBP10.5□□□□□ -0.73
CDT1-203ENST00000569140 RAB11BQ15907 218 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 MPV17LQ2QL34 196 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 DEFB112Q30KQ8 113 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 BRICD5Q6PL45 260 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 SUMF2Q8NBJ7 301 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 TSPAN14Q8NG11 270 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 OR6M1Q8NGM8 313 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 GAL3ST2Q9H3Q3 398 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 HEXA-AS1Q9H8Q6 139 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 STUB1Q9UNE7 303 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 SSR3Q9UNL2 185 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 LINC00312Q9Y6C7 94 aa10.5□□□□□ -0.73
CDT1-203ENST00000569140 SETD2Q9BYW2 2564 aaPredicted RBP10.49□□□□□ -0.73
CDT1-203ENST00000569140 A0A087WXM4 84 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 MEIKINA0A087WXM9 373 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 A0A0A6YYJ9 748 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 A0A0U1RQK1 487 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 TRDV1A0A1B0GX56 115 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 ODAMA1E959 279 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 MEIOCA2RUB1 952 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 SMIM30A4D0T7 59 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 TRIM77I1YAP6 450 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 UBBP0CG47 229 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 ERP29P30040 261 aaKnown RBP10.49□□□□□ -0.73
CDT1-203ENST00000569140 BPIFB3P59826 476 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 DYNC1I2Q13409 638 aaKnown RBP10.49□□□□□ -0.73
CDT1-203ENST00000569140 NHLRC3Q5JS37 347 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 NKAPLQ5M9Q1 402 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 HES5Q5TA89 166 aa10.49□□□□□ -0.73
CDT1-203ENST00000569140 PRAMEF5Q5TYX0 476 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms