RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 PPP1R35Q8TAP8 253 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 KLF14Q8TD94 323 aaPredicted RBP4.85□□□□□ -1.63
SF3B3-210ENST00000567654 CAPSLQ8WWF8 208 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 EMG1Q92979 244 aaKnown RBP4.85□□□□□ -1.63
SF3B3-210ENST00000567654 PPP1R14BQ96C90 147 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 TECTBQ96PL2 329 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 S100A13Q99584 98 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 GINS4Q9BRT9 223 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 URM1Q9BTM9 101 aaKnown RBP4.85□□□□□ -1.63
SF3B3-210ENST00000567654 FAAP24Q9BTP7 215 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 ADAT1Q9BUB4 502 aaKnown RBP4.85□□□□□ -1.63
SF3B3-210ENST00000567654 ACTR6Q9GZN1 396 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 OR51I2Q9H344 312 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 RANGRFQ9HD47 186 aaPredicted RBP4.85□□□□□ -1.63
SF3B3-210ENST00000567654 IL36GQ9NZH8 169 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 JKAMPQ9P055 326 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 PURGQ9UJV8 347 aaKnown RBP4.85□□□□□ -1.63
SF3B3-210ENST00000567654 SLC45A2Q9UMX9 530 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 VSIG4Q9Y279 399 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 DOCK11Q5JSL3 2073 aa4.85□□□□□ -1.63
SF3B3-210ENST00000567654 MAP1BP46821 2468 aaKnown RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 OR2AT4A6NND4 320 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 ZNF736B4DX44 427 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 ATP6V1G2-DDX39BF2Z307 99 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 PEX14O75381 377 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 SCGNO76038 276 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 CYB5AP00167 134 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 CSTBP04080 98 aaKnown RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 TFF1P04155 84 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 HOXD4P09016 255 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 TRAPPC2P0DI81 140 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 TRAPPC2BP0DI82 140 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 MPZP25189 248 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 ZFP36P26651 326 aaKnown RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 DUSP1P28562 367 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 OPRM1P35372 400 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 EIF2B2P49770 351 aaKnown RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 AP3S2P59780 193 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 UBE2MP61081 183 aaKnown RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 NKX6-1P78426 367 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 KLRB1Q12918 225 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 ZNF154Q13106 437 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 CBX3Q13185 183 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 FOXE3Q13461 319 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 ARFRP1Q13795 201 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 SNTB1Q13884 538 aaKnown RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 PPA1Q15181 289 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 PNLIPRP3Q17RR3 467 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 C2orf68Q2NKX9 166 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 EIF2S3LQ2VIR3 472 aaKnown RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 PRAMEF6Q5VXH4 476 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 ZNF826PQ6ZT77 177 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 MRGPRGQ86SM5 289 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 C11orf53Q8IXP5 236 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 ZSCAN4Q8NAM6 433 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 OR5A2Q8NGI9 324 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 OR5L1Q8NGL2 311 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 OR13G1Q8NGZ3 307 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 C1orf43Q9BWL3 253 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 OR51J1Q9H342 316 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 LIME1Q9H400 295 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 OPA3Q9H6K4 179 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 OBP2BQ9NPH6 170 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 IFT46Q9NQC8 304 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 TAS2R8Q9NYW2 309 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 EIF3KQ9UBQ5 218 aaKnown RBP4.84□□□□□ -1.63
SF3B3-210ENST00000567654 ST3GAL6Q9Y274 331 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 MPC1Q9Y5U8 109 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 ADGRG4Q8IZF6 3080 aa4.84□□□□□ -1.63
SF3B3-210ENST00000567654 PIEZO1Q92508 2521 aa4.84□□□□□ -1.64
SF3B3-210ENST00000567654 TRGV8A0A0C4DH27 118 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 A0A1B0GUH1 482 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 OR5B21A6NL26 309 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 F5H5P2 479 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 G3V3Q6 166 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 J3QT63 122 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 F2RL2O00254 374 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 SDCBPO00560 298 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 HSPB6O14558 160 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 AKR7A2O43488 359 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 DHFRP00374 187 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 FCGR3AP08637 254 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 SULT1A3P0DMM9 295 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 SULT1A4P0DMN0 295 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 PRKACAP17612 351 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 MALP21145 153 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 KITLGP21583 273 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 CA7P43166 264 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 CEBPDP49716 269 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 FABP6P51161 128 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 RAG2P55895 527 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 GMFBP60983 142 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 FGF12P61328 243 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 GNG3P63215 75 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 ADORA2A-AS1P86434 159 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 IL24Q13007 206 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 MAB21L1Q13394 359 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 RBMS2Q15434 407 aaKnown RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 MPPED2Q15777 294 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 SCGB2B2Q4G0G5 96 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms