RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 BCL3P20749 454 aa14.97□□□□□ -0.01
LINC01238-205ENST00000567549 BDH1Q02338 343 aa14.97□□□□□ -0.01
LINC01238-205ENST00000567549 SLC25A30Q5SVS4 291 aa14.97□□□□□ -0.01
LINC01238-205ENST00000567549 ZNF691Q5VV52 312 aa14.97□□□□□ -0.01
LINC01238-205ENST00000567549 CCBE1Q6UXH8 406 aaPredicted RBP14.97□□□□□ -0.01
LINC01238-205ENST00000567549 HEPN1Q6WQI6 88 aa14.97□□□□□ -0.01
LINC01238-205ENST00000567549 DYNAPQ8N1N2 210 aa14.97□□□□□ -0.01
LINC01238-205ENST00000567549 ACBD7Q8N6N7 88 aa14.97□□□□□ -0.01
LINC01238-205ENST00000567549 NECAP2Q9NVZ3 263 aa14.97□□□□□ -0.01
LINC01238-205ENST00000567549 OR6C3Q9NZP0 311 aa14.97□□□□□ -0.01
LINC01238-205ENST00000567549 GSTK1Q9Y2Q3 226 aa14.97□□□□□ -0.01
LINC01238-205ENST00000567549 GMPPBQ9Y5P6 360 aa14.97□□□□□ -0.01
LINC01238-205ENST00000567549 CMYA5Q8N3K9 4069 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 FAM90A22PA8MWA6 464 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 OOSP1A8MZH6 123 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 PSPNO60542 156 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 PF4V1P10720 104 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 CD28P10747 220 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 ZNF44P15621 663 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 CD33P20138 364 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 PTGFRP43088 359 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 KIR3DL2P43630 455 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 ZNF85Q03923 595 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 CENPVQ7Z7K6 275 aaPredicted RBP14.96□□□□□ -0.01
LINC01238-205ENST00000567549 OR4X2Q8NGF9 303 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 OR52N4Q8NGI2 321 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 OR5D14Q8NGL3 314 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 CORO2AQ92828 525 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 RNFT2Q96EX2 444 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 ADAT3Q96EY9 351 aaPredicted RBP14.96□□□□□ -0.01
LINC01238-205ENST00000567549 HRASLS5Q96KN8 279 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 COMMD4Q9H0A8 199 aa14.96□□□□□ -0.01
LINC01238-205ENST00000567549 AMMECR1Q9Y4X0 333 aaPredicted RBP14.96□□□□□ -0.01
LINC01238-205ENST00000567549 MEX3AA1L020 520 aaKnown RBP14.95□□□□□ -0.02
LINC01238-205ENST00000567549 E9PQ18 207 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 SIRPB1O00241 398 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 MAGEB3O15480 346 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 MPZL2O60487 215 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 KDM4BO94953 1096 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 OR2H2O95918 312 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 CDK2P24941 298 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 LMO1P25800 156 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 DUSP1P28562 367 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 POLR2IP36954 125 aaKnown RBP14.95□□□□□ -0.02
LINC01238-205ENST00000567549 OR3A1P47881 315 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 NPBWR2P48146 333 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 SNRPGP62308 76 aaKnown RBP14.95□□□□□ -0.02
LINC01238-205ENST00000567549 HABP2Q14520 560 aaPredicted RBP14.95□□□□□ -0.02
LINC01238-205ENST00000567549 TCF23Q7RTU1 214 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 RDH10Q8IZV5 341 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 TPRX1Q8N7U7 411 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 OR5AU1Q8NGC0 362 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 Q96MT0 163 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 CITED2Q99967 270 aaPredicted RBP14.95□□□□□ -0.02
LINC01238-205ENST00000567549 MMP28Q9H239 520 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 FRRS1LQ9P0K9 344 aa14.95□□□□□ -0.02
LINC01238-205ENST00000567549 ZNF729A6NN14 1252 aaPredicted RBP14.94□□□□□ -0.02
LINC01238-205ENST00000567549 ALX3O95076 343 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 DUS4LO95620 317 aaKnown RBP14.94□□□□□ -0.02
LINC01238-205ENST00000567549 PF4P02776 101 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 HCKP08631 526 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 CCDC159P0C7I6 412 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 CD34P28906 385 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 SNU13P55769 128 aaKnown RBP14.94□□□□□ -0.02
LINC01238-205ENST00000567549 KCTD21Q4G0X4 260 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 RBM48Q5RL73 367 aaKnown RBP14.94□□□□□ -0.02
LINC01238-205ENST00000567549 SERPINA12Q8IW75 414 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 ZNF565Q8N9K5 539 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 OR4P4Q8NGL7 312 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 MRAPQ8TCY5 172 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 OR5M11Q96RB7 305 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 GPR61Q9BZJ8 451 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 ZCCHC4Q9H5U6 513 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 INPP5EQ9NRR6 644 aa14.94□□□□□ -0.02
LINC01238-205ENST00000567549 TSSC4Q9Y5U2 329 aaPredicted RBP14.94□□□□□ -0.02
LINC01238-205ENST00000567549 IGKV1-9A0A0C4DH69 117 aa14.93□□□□□ -0.02
LINC01238-205ENST00000567549 TMEM212A6NML5 194 aa14.93□□□□□ -0.02
LINC01238-205ENST00000567549 J3QLW9 94 aa14.93□□□□□ -0.02
LINC01238-205ENST00000567549 OR2F2O95006 317 aa14.93□□□□□ -0.02
LINC01238-205ENST00000567549 FADS2O95864 444 aaKnown RBP14.93□□□□□ -0.02
LINC01238-205ENST00000567549 ZNF19P17023 458 aa14.93□□□□□ -0.02
LINC01238-205ENST00000567549 LOXL3P58215 753 aa14.93□□□□□ -0.02
LINC01238-205ENST00000567549 ALKBH1Q13686 389 aaKnown RBP14.93□□□□□ -0.02
LINC01238-205ENST00000567549 KRBOX4Q5JUW0 171 aa14.93□□□□□ -0.02
LINC01238-205ENST00000567549 LYG1Q8N1E2 194 aa14.93□□□□□ -0.02
LINC01238-205ENST00000567549 SYS1Q8N2H4 156 aa14.93□□□□□ -0.02
LINC01238-205ENST00000567549 OR13C9Q8NGT0 318 aa14.93□□□□□ -0.02
LINC01238-205ENST00000567549 WIPF2Q8TF74 440 aaPredicted RBP14.93□□□□□ -0.02
LINC01238-205ENST00000567549 SLC25A33Q9BSK2 321 aa14.93□□□□□ -0.02
LINC01238-205ENST00000567549 ODAMA1E959 279 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 DEGS1O15121 323 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 SULT1B1O43704 296 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 FAM106CPP0CH98 169 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 TMEM225BP0DP42 221 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 MTNR1BP49286 362 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 BLCAPP62952 87 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 SLC35A2P78381 396 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 SCN1BQ07699 218 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 C6orf141Q5SZD1 244 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 PRAMEF5Q5TYX0 476 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms