RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 RNFT2Q96EX2 444 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 NCOR1P1Q9H4R4 102 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 ZCCHC4Q9H5U6 513 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 AURKAIP1Q9NWT8 199 aaPredicted RBP11.98□□□□□ -0.49
RNF40-209ENST00000566703 OR6C3Q9NZP0 311 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 PRKDCP78527 4128 aaKnown RBP11.98□□□□□ -0.49
RNF40-209ENST00000566703 TCRBV4S1A1TA0A5B7 111 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 OR4C45A6NMZ5 311 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 ZNF729A6NN14 1252 aaPredicted RBP11.97□□□□□ -0.49
RNF40-209ENST00000566703 LY6LH3BQJ8 138 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 BUB1B-PAK6H3BSN5 160 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 ZNF44P15621 663 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 MNDAP41218 407 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 PTGFRP43088 359 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 SNU13P55769 128 aaKnown RBP11.97□□□□□ -0.49
RNF40-209ENST00000566703 ALKBH1Q13686 389 aaKnown RBP11.97□□□□□ -0.49
RNF40-209ENST00000566703 HLA-DRB5Q30154 266 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 TMEM95Q3KNT9 176 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 PRAMEF5Q5TYX0 476 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 FOXB2Q5VYV0 432 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 Q6P435 159 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 THNSL2Q86YJ6 484 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 OR13C3Q8NGS6 347 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 RFT1Q96AA3 541 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 PELI1Q96FA3 418 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 SLC25A33Q9BSK2 321 aa11.97□□□□□ -0.49
RNF40-209ENST00000566703 EXOGQ9Y2C4 368 aaKnown RBP11.97□□□□□ -0.49
RNF40-209ENST00000566703 E9PQ18 207 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 DEGS1O15121 323 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 DUS4LO95620 317 aaKnown RBP11.96□□□□□ -0.49
RNF40-209ENST00000566703 LPLP06858 475 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 CGB3P0DN86 165 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 CGB7P0DN87 165 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 PF4V1P10720 104 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 CD24P25063 80 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 MTNR1BP49286 362 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 SCN1BQ07699 218 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 ABCA11PQ4W5N1 156 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 TCTEX1D4Q5JR98 221 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 KRBOX4Q5JUW0 171 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 TPTE2P1Q5T6R2 138 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 BAIAP2L2Q6UXY1 529 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 SERPINA12Q8IW75 414 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 ZNF565Q8N9K5 539 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 OR4X2Q8NGF9 303 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 OR5D14Q8NGL3 314 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 OR13C9Q8NGT0 318 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 COQ2Q96H96 371 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 ZNF286AQ9HBT8 521 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 PCDHB16Q9NRJ7 776 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 ORC6Q9Y5N6 252 aa11.96□□□□□ -0.49
RNF40-209ENST00000566703 KBTBD11-OT1A0A1B0GTJ5 212 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 A0A1W2PRX2 142 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 SAC3D1A6NKF1 404 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 J3QLW9 94 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 SLC33A1O00400 549 aaPredicted RBP11.95□□□□□ -0.5
RNF40-209ENST00000566703 AMY1AP04745 511 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 AMY2AP04746 511 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 ALPLP05186 524 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 FAM106CPP0CH98 169 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 TMEM225BP0DP42 221 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 IGLL1P15814 213 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 ZNF19P17023 458 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 GDNFP39905 211 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 MRPL28Q13084 256 aaKnown RBP11.95□□□□□ -0.5
RNF40-209ENST00000566703 GALEQ14376 348 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 C17orf58Q2M2W7 97 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 ELP2Q6IA86 826 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 SYS1Q8N2H4 156 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 PARP16Q8N5Y8 322 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 OR51A4Q8NGJ6 313 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 OR10AC1Q8NH08 325 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 OR9G1Q8NH87 305 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 MYDGFQ969H8 173 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 RCC1LQ96I51 464 aaKnown RBP11.95□□□□□ -0.5
RNF40-209ENST00000566703 C4orf36Q96KX1 117 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 MYRFQ9Y2G1 1151 aa11.95□□□□□ -0.5
RNF40-209ENST00000566703 FAM90A18PA6NE21 464 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 FAM90A16PA6NEW6 464 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 FAM90A20PA6NIJ5 464 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 FAM90A9PA6NNJ1 464 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 FAM90A12PA8MX19 464 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 FAM90A5PA8MXJ8 464 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 CIB2O75838 187 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 CLIC3O95833 236 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 PF4P02776 101 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 FAM90A15PP0C7V4 464 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 FAM90A13PP0C7W8 464 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 FAM90A14PP0C7W9 464 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 FAM90A24PP0C7X0 464 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 ZP1P60852 638 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 SLC35A2P78381 396 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 CDK5R1Q15078 307 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 KISS1Q15726 138 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 SLC16A12Q6ZSM3 486 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 CCDC121Q6ZUS5 278 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 RNF144BQ7Z419 303 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 PXT1Q8NFP0 134 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 OR51T1Q8NGJ9 327 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 OR5D18Q8NGL1 313 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms