RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 LINC01551Q86U37 167 aa2.58□□□□□ -2
CHD9-218ENST00000566029 NIT1Q86X76 327 aa2.58□□□□□ -2
CHD9-218ENST00000566029 CMTM1Q8IZ96 169 aa2.58□□□□□ -2
CHD9-218ENST00000566029 TTC9BQ8N6N2 239 aa2.58□□□□□ -2
CHD9-218ENST00000566029 FNDC4Q9H6D8 234 aaPredicted RBP2.58□□□□□ -2
CHD9-218ENST00000566029 APOBEC3BQ9UH17 382 aaKnown RBP2.58□□□□□ -2
CHD9-218ENST00000566029 CLEC18AA5D8T8 446 aa2.58□□□□□ -2
CHD9-218ENST00000566029 FBXO45P0C2W1 286 aa2.58□□□□□ -2
CHD9-218ENST00000566029 FOLR1P15328 257 aa2.58□□□□□ -2
CHD9-218ENST00000566029 CEACAM8P31997 349 aaPredicted RBP2.58□□□□□ -2
CHD9-218ENST00000566029 NPBWR2P48146 333 aa2.58□□□□□ -2
CHD9-218ENST00000566029 CMC4P56277 68 aaPredicted RBP2.58□□□□□ -2
CHD9-218ENST00000566029 RPS21P63220 83 aaKnown RBP2.58□□□□□ -2
CHD9-218ENST00000566029 IAH1Q2TAA2 248 aaPredicted RBP2.58□□□□□ -2
CHD9-218ENST00000566029 PPP1R27Q86WC6 154 aa2.58□□□□□ -2
CHD9-218ENST00000566029 CLEC18CQ8NCF0 446 aa2.58□□□□□ -2
CHD9-218ENST00000566029 CYB5D2Q8WUJ1 264 aa2.58□□□□□ -2
CHD9-218ENST00000566029 TSLPQ969D9 159 aa2.58□□□□□ -2
CHD9-218ENST00000566029 C16orf70Q9BSU1 422 aa2.58□□□□□ -2
CHD9-218ENST00000566029 ALKBH7Q9BT30 221 aaPredicted RBP2.58□□□□□ -2
CHD9-218ENST00000566029 SPATC1LQ9H0A9 340 aa2.58□□□□□ -2
CHD9-218ENST00000566029 POFUT1Q9H488 388 aa2.58□□□□□ -2
CHD9-218ENST00000566029 P2RX2Q9UBL9 471 aa2.58□□□□□ -2
CHD9-218ENST00000566029 DOCK11Q5JSL3 2073 aa2.58□□□□□ -2
CHD9-218ENST00000566029 HEATR5AQ86XA9 2040 aa2.58□□□□□ -2
CHD9-218ENST00000566029 RIIAD1A6NNX1 92 aa2.58□□□□□ -2
CHD9-218ENST00000566029 NPPBP16860 134 aa2.58□□□□□ -2
CHD9-218ENST00000566029 TMEM267Q0VDI3 215 aaPredicted RBP2.58□□□□□ -2
CHD9-218ENST00000566029 SOHLH1Q5JUK2 328 aa2.58□□□□□ -2
CHD9-218ENST00000566029 MRPL21Q7Z2W9 205 aaKnown RBP2.58□□□□□ -2
CHD9-218ENST00000566029 EAF1Q96JC9 268 aaPredicted RBP2.58□□□□□ -2
CHD9-218ENST00000566029 LRRC3BQ96PB8 259 aa2.58□□□□□ -2
CHD9-218ENST00000566029 GTSF1LQ9H1H1 148 aa2.58□□□□□ -2
CHD9-218ENST00000566029 MRM2Q9UI43 246 aaKnown RBP2.58□□□□□ -2
CHD9-218ENST00000566029 RBFOX3A6NFN3 312 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ATXN7O15265 892 aaPredicted RBP2.57□□□□□ -2
CHD9-218ENST00000566029 LDB3O75112 727 aa2.57□□□□□ -2
CHD9-218ENST00000566029 MT-CO3P00414 261 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CNN3Q15417 329 aaKnown RBP2.57□□□□□ -2
CHD9-218ENST00000566029 SLC16A14Q7RTX9 510 aa2.57□□□□□ -2
CHD9-218ENST00000566029 TMEM150AQ86TG1 271 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR52R1Q8NGF1 315 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR2T27Q8NH04 317 aa2.57□□□□□ -2
CHD9-218ENST00000566029 FAM3DQ96BQ1 224 aa2.57□□□□□ -2
CHD9-218ENST00000566029 DDIT4LQ96D03 193 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR8B4Q96RC9 309 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ZNF587Q96SQ5 575 aaPredicted RBP2.57□□□□□ -2
CHD9-218ENST00000566029 SGPP1Q9BX95 441 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ZNF586Q9NXT0 402 aa2.57□□□□□ -2
CHD9-218ENST00000566029 TMED7Q9Y3B3 224 aa2.57□□□□□ -2
CHD9-218ENST00000566029 LTBP1Q14766 1721 aa2.57□□□□□ -2
CHD9-218ENST00000566029 LOC100289279A0A1B0GTE1 492 aa2.57□□□□□ -2
CHD9-218ENST00000566029 LOC102725191A0A1B0GVB3 256 aa2.57□□□□□ -2
CHD9-218ENST00000566029 XKRY2A2RUG3 117 aa2.57□□□□□ -2
CHD9-218ENST00000566029 MPPED1O15442 326 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CXCR1P25024 350 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CCKBRP32239 447 aa2.57□□□□□ -2
CHD9-218ENST00000566029 QRFPP83859 136 aa2.57□□□□□ -2
CHD9-218ENST00000566029 EFEMP1Q12805 493 aa2.57□□□□□ -2
CHD9-218ENST00000566029 PRTGQ2VWP7 1150 aa2.57□□□□□ -2
CHD9-218ENST00000566029 FDX2Q6P4F2 183 aa2.57□□□□□ -2
CHD9-218ENST00000566029 RFLNAQ6ZTI6 216 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ZNF101Q8IZC7 436 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CCDC71LQ8N9Z2 235 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CYB561A3Q8NBI2 242 aa2.57□□□□□ -2
CHD9-218ENST00000566029 PRR7Q8TB68 274 aa2.57□□□□□ -2
CHD9-218ENST00000566029 MS4A5Q9H3V2 200 aa2.57□□□□□ -2
CHD9-218ENST00000566029 MAP1LC3AQ9H492 121 aa2.57□□□□□ -2
CHD9-218ENST00000566029 YTHDF2Q9Y5A9 579 aaKnown RBP2.57□□□□□ -2
CHD9-218ENST00000566029 THSD7AQ9UPZ6 1657 aa2.57□□□□□ -2
CHD9-218ENST00000566029 FEZF1A0PJY2 475 aa2.57□□□□□ -2
CHD9-218ENST00000566029 TBL1XO60907 577 aa2.57□□□□□ -2
CHD9-218ENST00000566029 DUS4LO95620 317 aaKnown RBP2.57□□□□□ -2
CHD9-218ENST00000566029 RBP4P02753 201 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR5H8P0DN80 308 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ACRV1P26436 265 aa2.57□□□□□ -2
CHD9-218ENST00000566029 PBX2P40425 430 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR3A1P47881 315 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ROM1Q03395 351 aa2.57□□□□□ -2
CHD9-218ENST00000566029 TMEM183BQ1AE95 376 aa2.57□□□□□ -2
CHD9-218ENST00000566029 LEG1Q6P5S2 330 aa2.57□□□□□ -2
CHD9-218ENST00000566029 COX18Q8N8Q8 333 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR4K13Q8NH42 304 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR14L1PQ8NHC6 308 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR14C36Q8NHC7 312 aa2.57□□□□□ -2
CHD9-218ENST00000566029 TMEM170AQ8WVE7 144 aa2.57□□□□□ -2
CHD9-218ENST00000566029 KTI12Q96EK9 354 aaPredicted RBP2.57□□□□□ -2
CHD9-218ENST00000566029 SRSF8Q9BRL6 282 aaKnown RBP2.57□□□□□ -2
CHD9-218ENST00000566029 EDA2RQ9HAV5 297 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ZFP30Q9Y2G7 519 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ZNF727A8MUV8 499 aa2.57□□□□□ -2
CHD9-218ENST00000566029 UPK3AO75631 287 aa2.57□□□□□ -2
CHD9-218ENST00000566029 RND3P61587 244 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ANKRD55Q3KP44 614 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CCSMST1Q4G0I0 132 aa2.57□□□□□ -2
CHD9-218ENST00000566029 TCTEX1D1Q8N7M0 179 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SUMF1Q8NBK3 374 aa2.57□□□□□ -2
CHD9-218ENST00000566029 RNF185Q96GF1 192 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SDF2L1Q9HCN8 221 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CKAP5Q14008 2032 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms