RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 ACSM3Q53FZ2 586 aa12.6□□□□□ -0.39
COMMD4-212ENST00000565517 NHLRC3Q5JS37 347 aa12.6□□□□□ -0.39
COMMD4-212ENST00000565517 C16orf87Q6PH81 154 aa12.6□□□□□ -0.39
COMMD4-212ENST00000565517 SSMEM1Q8WWF3 244 aa12.6□□□□□ -0.39
COMMD4-212ENST00000565517 GCDHQ92947 438 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-212ENST00000565517 ZNF714Q96N38 554 aa12.6□□□□□ -0.39
COMMD4-212ENST00000565517 S100A13Q99584 98 aa12.6□□□□□ -0.39
COMMD4-212ENST00000565517 ING4Q9UNL4 249 aa12.6□□□□□ -0.39
COMMD4-212ENST00000565517 A0A1W2PPK0 400 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 MEGF11A6BM72 1044 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 DENRO43583 198 aaKnown RBP12.59□□□□□ -0.39
COMMD4-212ENST00000565517 SC5DO75845 299 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 CDRT1O95170 752 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 HTR3BO95264 441 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 CSTBP04080 98 aaKnown RBP12.59□□□□□ -0.39
COMMD4-212ENST00000565517 HKR1P10072 659 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 SAA4P35542 130 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 IER3P46695 156 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 SCN1BQ07699 218 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 TPBGQ13641 420 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 GPR176Q14439 515 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 TCF23Q7RTU1 214 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 NKAIN3Q8N8D7 197 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 CORO2AQ92828 525 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 UFD1Q92890 307 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 NR1H4Q96RI1 486 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-212ENST00000565517 CCDC90BQ9GZT6 254 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 DPAGT1Q9H3H5 408 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 Q9H521 79 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 IFT22Q9H7X7 185 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 UBE2J1Q9Y385 318 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-212ENST00000565517 STAB1Q9NY15 2570 aa12.59□□□□□ -0.39
COMMD4-212ENST00000565517 MEIOCA2RUB1 952 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 MAGEA13PA6NCF6 341 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 MRPS14O60783 128 aaKnown RBP12.58□□□□□ -0.4
COMMD4-212ENST00000565517 MAS1P04201 325 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 IGHV1-8P0DP01 117 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 PAX5Q02548 391 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 MLLT11Q13015 90 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-212ENST00000565517 TRAM1Q15629 374 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 LINC00596Q86U02 117 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 LYPD6Q86Y78 171 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 OSR2Q8N2R0 312 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 TPRX1Q8N7U7 411 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 OR13D1Q8NGV5 346 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 OR10K1Q8NGX5 313 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 PHYHIPQ92561 330 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 NKX3-1Q99801 234 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-212ENST00000565517 UQCC2Q9BRT2 126 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 TMED9Q9BVK6 235 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 PPA2Q9H2U2 334 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 NCOR1P1Q9H4R4 102 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 TAS2R3Q9NYW6 316 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 ZNRD1Q9P1U0 126 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 ST3GAL6Q9Y274 331 aa12.58□□□□□ -0.4
COMMD4-212ENST00000565517 TRGV10A0A0A0MS01 117 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 A0A1W2PRD5 423 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 A0A1W2PRF3 423 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 A0A1W2PRM7 423 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 PAHP00439 452 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 GTF2F2P13984 249 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 CPEP16870 476 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 KCNJ3P48549 501 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 RBM11P57052 281 aaKnown RBP12.57□□□□□ -0.4
COMMD4-212ENST00000565517 RPL15P61313 204 aaKnown RBP12.57□□□□□ -0.4
COMMD4-212ENST00000565517 AESQ08117 197 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 FOXL1Q12952 345 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 TBCEQ15813 527 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-212ENST00000565517 PIGYQ3MUY2 71 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 LIPKQ5VXJ0 399 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 C12orf54Q6X4T0 127 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 PNKDQ8N490 385 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 JAGN1Q8N5M9 183 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 BEND2Q8NDZ0 799 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 MRPS24Q96EL2 167 aaKnown RBP12.57□□□□□ -0.4
COMMD4-212ENST00000565517 MEGF9Q9H1U4 602 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 TCF7L1Q9HCS4 588 aa12.57□□□□□ -0.4
COMMD4-212ENST00000565517 MRPS28Q9Y2Q9 187 aaKnown RBP12.57□□□□□ -0.4
COMMD4-212ENST00000565517 RRP15Q9Y3B9 282 aaKnown RBP12.57□□□□□ -0.4
COMMD4-212ENST00000565517 TRAV24A0A0B4J272 114 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 ODAMA1E959 279 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 HSMCR30P0CW71 290 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 SERPINA2P20848 420 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 PSMA1P25786 263 aaKnown RBP12.56□□□□□ -0.4
COMMD4-212ENST00000565517 GLIPR1P48060 266 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 GP2P55259 537 aaKnown RBP12.56□□□□□ -0.4
COMMD4-212ENST00000565517 LGALS4P56470 323 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 GABARAPL2P60520 117 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 INSL4Q14641 139 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 MPV17LQ2QL34 196 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 SLC22A6Q4U2R8 563 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 PAN3Q58A45 887 aaKnown RBP12.56□□□□□ -0.4
COMMD4-212ENST00000565517 KRBOX4Q5JUW0 171 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 ZNF782Q6ZMW2 699 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-212ENST00000565517 CEACAM19Q7Z692 300 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 TRAPPC6BQ86SZ2 158 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 OR11H6Q8NGC7 330 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 DYRK2Q92630 601 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 MUL1Q969V5 352 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 FOXRED1Q96CU9 486 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms