RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 ZNF44P15621 663 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 CDK2P24941 298 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 CD34P28906 385 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 GTF2A1P52655 376 aaPredicted RBP12.58□□□□□ -0.4
CDH3-204ENST00000565453 GBX2P52951 348 aaPredicted RBP12.58□□□□□ -0.4
CDH3-204ENST00000565453 SMN1Q16637 294 aaKnown RBP12.58□□□□□ -0.4
CDH3-204ENST00000565453 KLHL22Q53GT1 634 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 ZNF691Q5VV52 312 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 ELP2Q6IA86 826 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 Q6ZS46 218 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 RTN4RL2Q86UN3 420 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 ABHD12Q8N2K0 398 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 CHST4Q8NCG5 386 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 OR51A2Q8NGJ7 313 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 NDNFQ8TB73 568 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 HAVCR2Q8TDQ0 301 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 WNT10AQ9GZT5 417 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 GAL3ST2Q9H3Q3 398 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 DHDHQ9UQ10 334 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 PCDHGB5Q9Y5G0 923 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 NOTCH1P46531 2555 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 F2RL2O00254 374 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 IGLV1-47P01700 117 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 TMEM225BP0DP42 221 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 HTR1DP28221 377 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 MTNR1BP49286 362 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 BLCAPP62952 87 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 BDH1Q02338 343 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 SLC34A1Q06495 639 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 SCN1BQ07699 218 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 XAF1Q6GPH4 301 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 OR52W1Q6IF63 320 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 C1QL4Q86Z23 238 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 PXT1Q8NFP0 134 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 TSEN15Q8WW01 171 aaKnown RBP12.57□□□□□ -0.4
CDH3-204ENST00000565453 RDH12Q96NR8 316 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 PRSS22Q9GZN4 317 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 PPIL3Q9H2H8 161 aaKnown RBP12.57□□□□□ -0.4
CDH3-204ENST00000565453 ZNF286AQ9HBT8 521 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 DPM3Q9P2X0 92 aa12.57□□□□□ -0.4
CDH3-204ENST00000565453 A0A087X0M5 115 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 A0A1B0GX30 115 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 EBAG9O00559 213 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 GABRPO00591 440 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 DEGS1O15121 323 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 OPN1MWP04001 364 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 OPN1MW2P0DN77 364 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 OPN1MW3P0DN78 364 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 CGB3P0DN86 165 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 CGB7P0DN87 165 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 CD28P10747 220 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 ETV1P50549 477 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 ATXN7L3Q14CW9 347 aaPredicted RBP12.56□□□□□ -0.4
CDH3-204ENST00000565453 C17orf58Q2M2W7 97 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 KRBOX4Q5JUW0 171 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 UTF1Q5T230 341 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 ASCL4Q6XD76 172 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 Q8NFD4 153 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 OR51T1Q8NGJ9 327 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 SMPD3Q9NY59 655 aaPredicted RBP12.56□□□□□ -0.4
CDH3-204ENST00000565453 TAS2R4Q9NYW5 299 aa12.56□□□□□ -0.4
CDH3-204ENST00000565453 TRAV24A0A0B4J272 114 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 FAM172BPA6NC97 362 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 ADARB2-AS1A8MUL3 147 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 FBXO24O75426 580 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 RAB3AP20336 220 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 PTGFRP43088 359 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 SOX2P48431 317 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 ZSCAN26Q16670 478 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 CCDC58Q4VC31 144 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 FBLN7Q53RD9 439 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 RPL22L1Q6P5R6 122 aaKnown RBP12.55□□□□□ -0.4
CDH3-204ENST00000565453 ZNF555Q8NEP9 628 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 ZNF596Q8TC21 504 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 OCSTAMPQ9BR26 566 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 NCOR1P1Q9H4R4 102 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 ING3Q9NXR8 418 aa12.55□□□□□ -0.4
CDH3-204ENST00000565453 SIRT4Q9Y6E7 314 aaPredicted RBP12.55□□□□□ -0.4
CDH3-204ENST00000565453 ZNF729A6NN14 1252 aaPredicted RBP12.54□□□□□ -0.4
CDH3-204ENST00000565453 LEUTXA8MZ59 168 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 H0YJX3 145 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 LY6LH3BQJ8 138 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 BAG2O95816 211 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 DCKP27707 260 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 IL13RA2Q14627 380 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 HLA-DRB5Q30154 266 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 TMEM95Q3KNT9 176 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 OR2G6Q5TZ20 316 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 C16orf82Q7Z2V1 217 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 LYG1Q8N1E2 194 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 CNIH3Q8TBE1 160 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 GPR148Q8TDV2 347 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 TNFAIP8L1Q8WVP5 186 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 OR6C3Q9NZP0 311 aa12.54□□□□□ -0.4
CDH3-204ENST00000565453 KIAA2026Q5HYC2 2103 aa12.53□□□□□ -0.4
CDH3-204ENST00000565453 PRKDCP78527 4128 aaKnown RBP12.53□□□□□ -0.4
CDH3-204ENST00000565453 KBTBD11-OT1A0A1B0GTJ5 212 aa12.53□□□□□ -0.4
CDH3-204ENST00000565453 G3V4G9 280 aa12.53□□□□□ -0.4
CDH3-204ENST00000565453 BUB1B-PAK6H3BSN5 160 aa12.53□□□□□ -0.4
CDH3-204ENST00000565453 OGG1O15527 345 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms