RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	OR3A3	P47888	321 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	POU3F4	P49335	361 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	CCR6	P51684	374 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	TAS2R31	P59538	309 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	ARPC4	P59998	168 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	GRB2	P62993	217 aa	Known RBP	3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	SLC35A1	P78382	337 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	CYCS	P99999	105 aa	Known RBP	3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	PMP22	Q01453	160 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	REL	Q04864	619 aa	Predicted RBP	3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	CAMK2D	Q13557	499 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	PPA1	Q15181	289 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	OR7A5	Q15622	319 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	C2orf76	Q3KRA6	126 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	MEST	Q5EB52	335 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	C6orf183	Q5T699	404 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	C1orf189	Q5VU69	101 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	TMEM225	Q6GV28	225 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	STEAP1B	Q6NZ63	245 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	C3orf33	Q6P1S2	294 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	FAHD2B	Q6P2I3	314 aa	Predicted RBP	3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	CBLN3	Q6UW01	205 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	TEX261	Q6UWH6	196 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	RFPL4B	Q6ZWI9	263 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	SLC35D2	Q76EJ3	337 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	ANKRD37	Q7Z713	158 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	NR2C2AP	Q86WQ0	139 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	TMEM17	Q86X19	198 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	CATSPERD	Q86XM0	798 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	TMEM219	Q86XT9	240 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	C9orf40	Q8IXQ3	194 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	PRSS58	Q8IYP2	241 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	PRR22	Q8IZ63	422 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	C1orf87	Q8N0U7	546 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	C9orf62	Q8N4C0	152 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	FTMT	Q8N4E7	242 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	SLC22A24	Q8N4F4	322 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	RPRML	Q8N4K4	120 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	JAGN1	Q8N5M9	183 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	MAPK1IP1L	Q8NDC0	245 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	OR13C5	Q8NGS8	318 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	SMAP2	Q8WU79	429 aa	Predicted RBP	3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	FAHD2A	Q96GK7	314 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	SLC25A44	Q96H78	314 aa	Predicted RBP	3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	S100A13	Q99584	98 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	UTP23	Q9BRU9	249 aa	Known RBP	3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	URM1	Q9BTM9	101 aa	Known RBP	3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	DEFB126	Q9BYW3	111 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	TTTY10	Q9BZA0	68 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	METTL17	Q9H7H0	456 aa	Predicted RBP	3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	PLSCR4	Q9NRQ2	329 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	CENPM	Q9NSP4	180 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	SLCO1C1	Q9NYB5	712 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	DHCR7	Q9UBM7	475 aa	Known RBP	3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	GHRL	Q9UBU3	117 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	KIF25	Q9UIL4	384 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	OR52A1	Q9UKL2	312 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	NPTN	Q9Y639	398 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160		U3KQ87	197 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	UBR4	Q5T4S7	5183 aa		3.75	□□□□□ -1.81
BBS4-208	ENST00000565160	MED12L	Q86YW9	2145 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	IGLV3-12	A0A075B6K2	115 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	IGHV4OR15-8	A0A075B7B6	117 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	IGLV3-32	A0A0A0MS00	114 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160		A0A0B4J203	849 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160		A0A0B4J293	547 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	TRBV11-1	A0A0K0K1C0	115 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160		A0A1W2PNV4	684 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	IFITM10	A6NMD0	228 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	HMSD	A8MTL9	139 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	IDS	B3KWA1	339 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160		H7C1C5	153 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160		M0QZ24	198 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	PIN1P1	O15428	100 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	SYT7	O43581	403 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	NPIPB7	O75200	414 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	MTRF1	O75570	445 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	SCRG1	O75711	98 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	VAMP5	O95183	116 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	MELTF	P08582	738 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	PET100	P0DJ07	73 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	ICAM2	P13598	275 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	GABRA1	P14867	456 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	MYOD1	P15172	320 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	ZNF43	P17038	809 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	LAP3	P28838	519 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	BTC	P35070	178 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	VEGFC	P49767	419 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	TNFSF10	P50591	281 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	UBE2M	P61081	183 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	LCN6	P62502	163 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	RPS27A	P62979	156 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	UBA52	P62987	128 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	EIF5A	P63241	154 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	RPL36A	P83881	106 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	BAMBI	Q13145	260 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	GK2	Q14410	553 aa	Predicted RBP	3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	GRK1	Q15835	563 aa		3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	RNASE10	Q5GAN6	216 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-208	ENST00000565160	WDR38	Q5JTN6	314 aa		3.74	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms