RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 FAM60AQ9NP50 221 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 IFNKQ9P0W0 207 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 AFDNP55196 1824 aaKnown RBP1.58□□□□□ -2.16
PALB2-203ENST00000565038 WNK3Q9BYP7 1800 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 ELP1O95163 1332 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 SBF1O95248 1867 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 ANKRD31Q8N7Z5 1873 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 CASP8AP2Q9UKL3 1982 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 RIC1Q4ADV7 1423 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 RGPD3A6NKT7 1758 aaPredicted RBP1.57□□□□□ -2.16
PALB2-203ENST00000565038 RGPD4Q7Z3J3 1758 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 IGKV1OR2-108A0A075B7D4 117 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 J3QKU1 62 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 ZBTB5O15062 677 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 PTTG1O95997 202 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 GZMAP12544 262 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 SRMP19623 302 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 PRPS1L1P21108 318 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 MSR1P21757 451 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 ERFP50548 548 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 YWHAEP62258 255 aaKnown RBP1.57□□□□□ -2.16
PALB2-203ENST00000565038 LCN2P80188 198 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 IL5RAQ01344 420 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 HSP90AA4PQ58FG1 418 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 C6orf183Q5T699 404 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 MRPL21Q7Z2W9 205 aaKnown RBP1.57□□□□□ -2.16
PALB2-203ENST00000565038 VTCN1Q7Z7D3 282 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 ITPRIPQ8IWB1 547 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 ZCCHC24Q8N2G6 241 aaKnown RBP1.57□□□□□ -2.16
PALB2-203ENST00000565038 TCP10LQ8TDR4 215 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 YIPF5Q969M3 257 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 ZMAT5Q9UDW3 170 aaKnown RBP1.57□□□□□ -2.16
PALB2-203ENST00000565038 FLVCR2Q9UPI3 526 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 KPTNQ9Y664 436 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 TNRC6CQ9HCJ0 1690 aaKnown RBP1.57□□□□□ -2.16
PALB2-203ENST00000565038 WDR90Q96KV7 1748 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 NRXN2Q9P2S2 1712 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 CEP290O15078 2479 aa1.57□□□□□ -2.16
PALB2-203ENST00000565038 KIF13BQ9NQT8 1826 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 SSC5DA1L4H1 1573 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 DUOX1Q9NRD9 1551 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 LAMA3Q16787 3333 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 VCANP13611 3396 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 A0A0B4J2E0 115 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 CENPXA8MT69 81 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 HACD1B0YJ81 288 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 H3BQ85 93 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 UPK1BO75841 260 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 TACSTD2P09758 323 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 STAG3L2P0CL84 134 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 CCL5P13501 91 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 GNRHRP30968 328 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 TUFMP49411 452 aaKnown RBP1.56□□□□□ -2.16
PALB2-203ENST00000565038 DAOAP59103 153 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 SNAP25P60880 206 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 FKBP1AP62942 108 aaKnown RBP1.56□□□□□ -2.16
PALB2-203ENST00000565038 PAFAH1B2P68402 229 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 CAVIN4Q5BKX8 364 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 ULK3Q6PHR2 472 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 TRMT10CQ7L0Y3 403 aaKnown RBP1.56□□□□□ -2.16
PALB2-203ENST00000565038 NDUFAF7Q7L592 441 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 FAM122BQ7Z309 247 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 FBXO36Q8NEA4 188 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 FAM57AQ8TBR7 257 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 NAT6Q93015 286 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 SMARCD1Q96GM5 515 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 IL22Q9GZX6 179 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 ARV1Q9H2C2 271 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 FBXO44Q9H4M3 255 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 PEF1Q9UBV8 284 aaKnown RBP1.56□□□□□ -2.16
PALB2-203ENST00000565038 VAX2Q9UIW0 290 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 OR51B2Q9Y5P1 312 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 COL5A3P25940 1745 aaPredicted RBP1.56□□□□□ -2.16
PALB2-203ENST00000565038 QSER1Q2KHR3 1735 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 MROH5Q6ZUA9 1318 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 SCN11AQ9UI33 1791 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 KIF20BQ96Q89 1820 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 IBTKQ9P2D0 1353 aaPredicted RBP1.56□□□□□ -2.16
PALB2-203ENST00000565038 MED23Q9ULK4 1368 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 FER1L6Q2WGJ9 1857 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 CCDC88AQ3V6T2 1871 aa1.56□□□□□ -2.16
PALB2-203ENST00000565038 HTTP42858 3142 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 KIAA0100Q14667 2235 aaKnown RBP1.55□□□□□ -2.16
PALB2-203ENST00000565038 OTOGLQ3ZCN5 2332 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 TRAV8-6A0A0B4J262 113 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 A0A1W2PPV4 95 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 ZNF99A8MXY4 864 aaPredicted RBP1.55□□□□□ -2.16
PALB2-203ENST00000565038 ZNF701M0R085 212 aaPredicted RBP1.55□□□□□ -2.16
PALB2-203ENST00000565038 SYNGR2O43760 224 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 ENTPD6O75354 484 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 CXorf1O96002 111 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 PRKACAP17612 351 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 PTNP21246 168 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 NUP62P37198 522 aaPredicted RBP1.55□□□□□ -2.16
PALB2-203ENST00000565038 FOXA1P55317 472 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 CLDN18P56856 261 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 SPAG1Q07617 926 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 C5orf64Q2M2E5 130 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 TPRG1LQ5T0D9 272 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 THOC7Q6I9Y2 204 aaKnown RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms