RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 NECAP2Q9NVZ3 263 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 FBXL17Q9UF56 701 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 ZNF230Q9UIE0 474 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 C14orf166Q9Y224 244 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 ST3GAL6Q9Y274 331 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 TNRC6AQ8NDV7 1962 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 BDP1A6H8Y1 2624 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 TRBV6-7A0A0A0MS04 114 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 IGKV1-12A0A0C4DH73 117 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 C5orf49A4QMS7 147 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 C5orf51A6NDU8 294 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 A8MZ25 164 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 SDCBPO00560 298 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 PDCD6O75340 191 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 IGKV1D-12P01611 117 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 HLA-HP01893 362 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 CTSDP07339 412 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 LIPCP11150 499 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 CD79AP11912 226 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 FUT3P21217 361 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 TAGLN2P37802 199 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 TIRAPP58753 221 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 UBA52P62987 128 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 SUPT4H1P63272 117 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 NKAPLQ5M9Q1 402 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 FBXW9Q5XUX1 488 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 ZNF660Q6AZW8 331 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 IGFL2Q6UWQ7 119 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 MRPL21Q7Z2W9 205 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 NUFIP2Q7Z417 695 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 CCDC36Q8IYA8 594 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 INO80EQ8NBZ0 244 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 OR10AD1Q8NGE0 317 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 OR5A2Q8NGI9 324 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 OR5L1Q8NGL2 311 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 OR5M9Q8NGP3 310 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 PHYHIPLQ96FC7 376 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 GMPPAQ96IJ6 420 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 FAAP24Q9BTP7 215 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 CHMP1AQ9HD42 196 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 ZMAT5Q9UDW3 170 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 AK3Q9UIJ7 227 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 A0A1B0GW55 424 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 KANTRA0A1W2PQU2 76 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 PQLC2LA1A4F0 135 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 SLC22A20A6NK97 555 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 ZNF850A8MQ14 1090 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 CCSO14618 274 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 GEMIN2O14893 280 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 IGHG3P01860 377 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 SFTPBP07988 381 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 FCGR3AP08637 254 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 DUX4L2P0CJ85 424 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 DUX4L3P0CJ86 424 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 DUX4L4P0CJ87 422 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 DUX4L5P0CJ88 424 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 DUX4L6P0CJ89 424 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 DUX4L7P0CJ90 424 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 OR5H8P0DN80 308 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 LYL1P12980 280 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 GLRA1P23415 457 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 APLNRP35414 380 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 PTTG1IPP53801 180 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 RBM11P57052 281 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 TGIF1Q15583 401 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 MKXQ8IYA7 352 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 ZDHHC23Q8IYP9 409 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 FBXL14Q8N1E6 418 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 ZNF611Q8N823 705 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 OR56B2PQ8NGI1 322 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 OR1K1Q8NGR3 316 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 BCL2L2Q92843 193 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 WBP1Q96G27 269 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 HIST1H2AAQ96QV6 131 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 ZNF2Q9BSG1 426 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 PIMREGQ9BSJ6 248 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 DEFB127Q9H1M4 99 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 ZNF286AQ9HBT8 521 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 ASCL3Q9NQ33 180 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 TMEM140Q9NV12 185 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 C1orf123Q9NWV4 160 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 DUX4Q9UBX2 424 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 DUSP13Q9UII6 198 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 MPC1Q9Y5U8 109 aa6.23□□□□□ -1.41
HERPUD1-209ENST00000564678 ARHGAP21Q5T5U3 1957 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 RNF222A6NCQ9 220 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 PGAM2P15259 253 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 CCNOP22674 350 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 FOXG1P55316 489 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 TGFBR3Q03167 851 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 PRDX4Q13162 271 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 C9orf135Q5VTT2 229 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 RGS7BPQ6MZT1 257 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 RBPMS2Q6ZRY4 209 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 Q6ZS49 121 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 COMMD7Q86VX2 200 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 CALHM1Q8IU99 346 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 SGPP2Q8IWX5 399 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 DEFB124Q8NES8 71 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 C2orf50Q96LR7 162 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms