RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 Q8NFD4 153 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 OR4S1Q8NGB4 309 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 OR51T1Q8NGJ9 327 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 OR13D1Q8NGV5 346 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 DYRK2Q92630 601 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 OR14A2Q96R54 314 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 IL36GQ9NZH8 169 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 ZNRD1Q9P1U0 126 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 BLOC1S6Q9UL45 172 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 RAB26Q9ULW5 256 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 ING4Q9UNL4 249 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 TENM1Q9UKZ4 2725 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 TRGV10A0A0A0MS01 117 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 TRBV5-7A0A0A0MS05 114 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 A0A0G2JK05 382 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 MEGF11A6BM72 1044 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 RGS10O43665 173 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 HTR3BO95264 441 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 VHLP40337 213 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 DLX1P56177 255 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 DLX6P56179 175 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 PRB3Q04118 309 aaPredicted RBP10.93□□□□□ -0.66
CLK3-216ENST00000564468 GPR50Q13585 617 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 MED22Q15528 200 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 RBM48Q5RL73 367 aaKnown RBP10.93□□□□□ -0.66
CLK3-216ENST00000564468 Q6P435 159 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 GDPGP1Q6ZNW5 385 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 LINC00596Q86U02 117 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 BEND2Q8NDZ0 799 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 OR5R1Q8NH85 324 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 NR1H4Q96RI1 486 aaPredicted RBP10.93□□□□□ -0.66
CLK3-216ENST00000564468 ZNF184Q99676 751 aaPredicted RBP10.93□□□□□ -0.66
CLK3-216ENST00000564468 GAL3ST2Q9H3Q3 398 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 DUSP21Q9H596 190 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 TNFRSF19Q9NS68 423 aa10.93□□□□□ -0.66
CLK3-216ENST00000564468 A0A1B0GUS0 222 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 FAM181BA6NEQ2 426 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 SLC33A1O00400 549 aaPredicted RBP10.92□□□□□ -0.66
CLK3-216ENST00000564468 IGHV1-8P0DP01 117 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 OR3A4PP47883 348 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 KCNJ3P48549 501 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 AWAT1Q58HT5 328 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 NHLRC3Q5JS37 347 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 KRBOX4Q5JUW0 171 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 OR52W1Q6IF63 320 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 HCP5Q6MZN7 132 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 ZNF782Q6ZMW2 699 aaPredicted RBP10.92□□□□□ -0.66
CLK3-216ENST00000564468 OSR2Q8N2R0 312 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 PNKDQ8N490 385 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 JAGN1Q8N5M9 183 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 TPRX1Q8N7U7 411 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 NKAIN3Q8N8D7 197 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 CORO2AQ92828 525 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 UFD1Q92890 307 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 DERL3Q96Q80 235 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 BARHL1Q9BZE3 327 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 CHIAQ9BZP6 476 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 CCDC90BQ9GZT6 254 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 PPA2Q9H2U2 334 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 Q9H521 79 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 ISYNA1Q9NPH2 558 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 TAS2R3Q9NYW6 316 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 OR6C3Q9NZP0 311 aa10.92□□□□□ -0.66
CLK3-216ENST00000564468 TBL2Q9Y4P3 447 aaKnown RBP10.92□□□□□ -0.66
CLK3-216ENST00000564468 TRAV8-7A0A075B6U6 113 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 A0A1W2PPK0 400 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 POM121CA8CG34 1229 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 CLPXO76031 633 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 CDRT1O95170 752 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 IGHV4-59P01825 116 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 GTF2F2P13984 249 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 COX7A1P24310 79 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 CRHBPP24387 322 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 AESQ08117 197 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 IRF3Q14653 427 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 TRAM1Q15629 374 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 AANATQ16613 207 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 ACSM3Q53FZ2 586 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 PAN3Q58A45 887 aaKnown RBP10.91□□□□□ -0.66
CLK3-216ENST00000564468 PRSS48Q7RTY5 328 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 OR11H6Q8NGC7 330 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 OR10K1Q8NGX5 313 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 OR4F5Q8NH21 305 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 FOXRED1Q96CU9 486 aaPredicted RBP10.91□□□□□ -0.66
CLK3-216ENST00000564468 ORAI1Q96D31 301 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 MRPS24Q96EL2 167 aaKnown RBP10.91□□□□□ -0.66
CLK3-216ENST00000564468 CNBD2Q96M20 576 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 OR5M11Q96RB7 305 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 MEGF9Q9H1U4 602 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 NCOR1P1Q9H4R4 102 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 TCF7L1Q9HCS4 588 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 ST3GAL6Q9Y274 331 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 LSM2Q9Y333 95 aaKnown RBP10.91□□□□□ -0.66
CLK3-216ENST00000564468 SESN1Q9Y6P5 492 aa10.91□□□□□ -0.66
CLK3-216ENST00000564468 ODAMA1E959 279 aa10.9□□□□□ -0.66
CLK3-216ENST00000564468 MAS1P04201 325 aa10.9□□□□□ -0.66
CLK3-216ENST00000564468 ARG1P05089 322 aa10.9□□□□□ -0.66
CLK3-216ENST00000564468 SERPINA2P20848 420 aa10.9□□□□□ -0.66
CLK3-216ENST00000564468 GLIPR1P48060 266 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms