RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 TAS2R8Q9NYW2 309 aa10.74□□□□□ -0.69
CLK3-214ENST00000564096 ZNF222Q9UK12 451 aa10.74□□□□□ -0.69
CLK3-214ENST00000564096 PKDREJQ9NTG1 2253 aa10.74□□□□□ -0.69
CLK3-214ENST00000564096 SPTAN1Q13813 2472 aaKnown RBP10.73□□□□□ -0.69
CLK3-214ENST00000564096 TRAV24A0A0B4J272 114 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 FUOMA2VDF0 154 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 POM121CA8CG34 1229 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 SIGLEC5O15389 551 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 UPK1BO75841 260 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 RBBP9O75884 186 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 ECDO95905 644 aaPredicted RBP10.73□□□□□ -0.69
CLK3-214ENST00000564096 IGHV4-39P01824 125 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 GYPAP02724 150 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 CSN2P05814 226 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 CSF1P09603 554 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 IL7P13232 177 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 PAX1P15863 534 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 DTYMKP23919 212 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 DNASE1P24855 282 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 LMO1P25800 156 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 GPR6P46095 362 aaPredicted RBP10.73□□□□□ -0.69
CLK3-214ENST00000564096 CEBPDP49716 269 aaPredicted RBP10.73□□□□□ -0.69
CLK3-214ENST00000564096 PDLIM4P50479 330 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 DEFA1P59665 94 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 DEFA3P59666 94 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 DGCR2P98153 550 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 ZMYND11Q15326 602 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 GRK1Q15835 563 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 TMEM155Q4W5P6 130 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 FAM201AQ5SY85 155 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 CLEC2AQ6UVW9 174 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 NLRC3Q7RTR2 1065 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 TGIF2LYQ8IUE0 185 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 CD177Q8N6Q3 437 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 TMEM185AQ8NFB2 350 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 OR5T2Q8NGG2 359 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 GPX8Q8TED1 209 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 GCDHQ92947 438 aaPredicted RBP10.73□□□□□ -0.69
CLK3-214ENST00000564096 SEH1LQ96EE3 360 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 MED30Q96HR3 178 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 SNX22Q96L94 193 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 THAP7Q9BT49 309 aaPredicted RBP10.73□□□□□ -0.69
CLK3-214ENST00000564096 CHST6Q9GZX3 395 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 PPA2Q9H2U2 334 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 ABCB10Q9NRK6 738 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 BEX4Q9NWD9 120 aaPredicted RBP10.73□□□□□ -0.69
CLK3-214ENST00000564096 AK3Q9UIJ7 227 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 MGAT4AQ9UM21 535 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 ABCA4P78363 2273 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 ROS1P08922 2347 aa10.73□□□□□ -0.69
CLK3-214ENST00000564096 TMEM30CPA0ZSE6 113 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 UBE2QL1A1L167 161 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 LYNX1G3V0Z9 82 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 NDUFS8O00217 210 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 MGST3O14880 152 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 TMPRSS2O15393 492 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 LY6HO94772 140 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 ZNF205O95201 554 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 IGHV2-70P01814 119 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 LYNX1P0DP58 116 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 COL8A2P25067 703 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 FAUP35544 74 aaKnown RBP10.72□□□□□ -0.69
CLK3-214ENST00000564096 GDNFP39905 211 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 DSCR9P59020 149 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 HOXA4Q00056 320 aaPredicted RBP10.72□□□□□ -0.69
CLK3-214ENST00000564096 ATXN7L3Q14CW9 347 aaPredicted RBP10.72□□□□□ -0.69
CLK3-214ENST00000564096 ATPAF1Q5TC12 328 aaPredicted RBP10.72□□□□□ -0.69
CLK3-214ENST00000564096 ZNF57Q68EA5 555 aaPredicted RBP10.72□□□□□ -0.69
CLK3-214ENST00000564096 ZNF788Q6ZQV5 615 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 LURAP1LQ8IV03 231 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 TOMM5Q8N4H5 51 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 OR5D13Q8NGL4 314 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 OR52I2Q8NH67 350 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 DEDD2Q8WXF8 326 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 TRIM63Q969Q1 353 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 GAFA1Q96PS6 74 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 PIMREGQ9BSJ6 248 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 FAAP24Q9BTP7 215 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 GSX2Q9BZM3 304 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 MTFP1Q9UDX5 166 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 ZNF107Q9UII5 783 aaPredicted RBP10.72□□□□□ -0.69
CLK3-214ENST00000564096 KCNK7Q9Y2U2 307 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 TANC2Q9HCD6 1990 aa10.72□□□□□ -0.69
CLK3-214ENST00000564096 A0A1W2PQ09 198 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 ADAM20O43506 726 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 NDUFB3O43676 98 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 SSX4O60224 188 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 ZNF737O75373 536 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 FCGR3AP08637 254 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 PTHLHP12272 177 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 RPS2P15880 293 aaKnown RBP10.71□□□□□ -0.69
CLK3-214ENST00000564096 TBPP20226 339 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 OR3A1P47881 315 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 TAS2R19P59542 299 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 PAX5Q02548 391 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 GUCA2AQ02747 115 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 ACTBL2Q562R1 376 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 LRRC10Q5BKY1 277 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 AVPI1Q5T686 147 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 GDPD3Q7L5L3 318 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms