RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 POU3F1Q03052 451 aaPredicted RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 D2HGDHQ8N465 521 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 M0R296 226 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 PIAS2O75928 621 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 SRP19P09132 144 aaKnown RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 NPPBP16860 134 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 FKBP2P26885 142 aaKnown RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 SLC25A43Q8WUT9 341 aaPredicted RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 MRGPRX1Q96LB2 322 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 PGLYRP3Q96LB9 341 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 ADH4P08319 380 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 NPSP0C0P6 89 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 BCL3P20749 454 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 SSBP4Q9BWG4 385 aaPredicted RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 YLPM1P49750 1951 aaKnown RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 APODP05090 189 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 MRGPREQ86SM8 312 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 OR4X2Q8NGF9 303 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 ERGIC1Q969X5 290 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 LYRM4Q9HD34 91 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 CCL27Q9Y4X3 112 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 DOT1LQ8TEK3 1739 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 PIKFYVEQ9Y2I7 2098 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 FBLL1A6NHQ2 334 aaKnown RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 WISP3O95389 354 aaPredicted RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 ONECUT2O95948 504 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 GCSHP23434 173 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 SHBQ15464 509 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 TCTN1Q2MV58 587 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 GJC3Q8NFK1 279 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 OR2W1Q9Y3N9 320 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 AHDC1Q5TGY3 1603 aaPredicted RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 A0A0G2JMM0 328 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 A0A1W2PPB8 328 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 KIR3DP1A8MWS1 328 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 PRAMEF26H0Y7S4 382 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 CD226Q15762 336 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 NBPF12Q5TAG4 269 aaPredicted RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 PRAMEF5Q5TYX0 476 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 PRAMEF6Q5VXH4 476 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 LAIR1Q6GTX8 287 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 RBMXL3Q8N7X1 1067 aaKnown RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 OR10V1Q8NGI7 309 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 TXNIPQ9H3M7 391 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 KIAA1217Q5T5P2 1943 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 TRBV6-7A0A0A0MS04 114 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 C17orf105B2RV13 164 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 HBZP02008 142 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 FAM87AP0C7U9 286 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 FLT3LGP49771 235 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 ADAD2Q8NCV1 583 aaKnown RBP5.55□□□□□ -1.52
CLK3-212ENST00000563418 SDF2Q99470 211 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 PBOV1Q9GZY1 135 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 PLSCR2Q9NRY7 297 aa5.55□□□□□ -1.52
CLK3-212ENST00000563418 PHLPP1O60346 1717 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 SERTM2A0A1B0GWG4 89 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 LRRC3CA6NJW4 275 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 B3GALT4O96024 378 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 IQCF3P0C7M6 154 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 ZFP36L2P47974 494 aaKnown RBP5.54□□□□□ -1.52
CLK3-212ENST00000563418 PRDX1Q06830 199 aaKnown RBP5.54□□□□□ -1.52
CLK3-212ENST00000563418 ARL16Q0P5N6 197 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 OR10J3Q5JRS4 329 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 MED25Q71SY5 747 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 GATSQ8NAP1 163 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 IL17FQ96PD4 163 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 TAAR6Q96RI8 345 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 CITED2Q99967 270 aaPredicted RBP5.54□□□□□ -1.52
CLK3-212ENST00000563418 ULBP2Q9BZM5 246 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 SLC25A22Q9H936 323 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 ZNF391Q9UJN7 358 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 SCN3AQ9NY46 2000 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 ANKRD30BLA7E2S9 258 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 ZIC2O95409 532 aaPredicted RBP5.54□□□□□ -1.52
CLK3-212ENST00000563418 MFAP5Q13361 173 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 AQP3Q92482 292 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 HSD17B8Q92506 261 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 C10orf35Q96D05 121 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 SLC25A38Q96DW6 304 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 A1L4Q6 167 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 HELTA6NFD8 242 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 OR5B21A6NL26 309 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 MMDQ15546 238 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 WDR38Q5JTN6 314 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 HINT2Q9BX68 163 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 TXNRD2Q9NNW7 524 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 ZNF257Q9Y2Q1 563 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 TIMM9Q9Y5J7 89 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 C7orf71A4D174 169 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 OR1C1Q15619 314 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 OR4C12Q96R67 309 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 FOXD3Q9UJU5 478 aaPredicted RBP5.54□□□□□ -1.52
CLK3-212ENST00000563418 TRAV14DV4A0A0A6YYC5 116 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 B4GALT2O60909 372 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 EMP1P54849 157 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 FAM219AQ8IW50 185 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 DIRC2Q96SL1 478 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 ZFYVE21Q9BQ24 234 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 CKAP5Q14008 2032 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 ZNF236Q9UL36 1845 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms