RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 GPER1Q99527 375 aa13.88□□□□□ -0.19
CDC42BPB-208ENST00000561271 FAM192AQ9GZU8 254 aa13.88□□□□□ -0.19
CDC42BPB-208ENST00000561271 FOXJ3Q9UPW0 622 aa13.88□□□□□ -0.19
CDC42BPB-208ENST00000561271 A0A0G2JK05 382 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 ODAMA1E959 279 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 CDK2P24941 298 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 LMO1P25800 156 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 DCKP27707 260 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 GDNFP39905 211 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 KIR2DS4P43632 304 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 MTNR1BP49286 362 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 ZNF529Q6P280 563 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 RPL22L1Q6P5R6 122 aaKnown RBP13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 CCBE1Q6UXH8 406 aaPredicted RBP13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 SATL1Q86VE3 508 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 KLHDC1Q8N7A1 406 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 OR13C5Q8NGS8 318 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 OR10K1Q8NGX5 313 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 GPR148Q8TDV2 347 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 TNFAIP8L1Q8WVP5 186 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 PPIL3Q9H2H8 161 aaKnown RBP13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 GAL3ST2Q9H3Q3 398 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 RHOFQ9HBH0 211 aa13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 SIRT4Q9Y6E7 314 aaPredicted RBP13.87□□□□□ -0.19
CDC42BPB-208ENST00000561271 A6NDX4 124 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 F2RL2O00254 374 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 DEGS1O15121 323 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 LALBAP00709 142 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 CSN2P05814 226 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 MYL12AP19105 171 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 SLC34A1Q06495 639 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 HABP2Q14520 560 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 CCDC58Q4VC31 144 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 KRBOX4Q5JUW0 171 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 MINOS1Q5TGZ0 78 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 TMPRSS11AQ6ZMR5 421 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 C11orf44Q8N8P7 122 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 CHST4Q8NCG5 386 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 OR4P4Q8NGL7 312 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 TMEM106AQ96A25 262 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 ORAI1Q96D31 301 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 CPNE2Q96FN4 548 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 NR1H4Q96RI1 486 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 ZNF702PQ9H963 129 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 CLEC2DQ9UHP7 191 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 DIMT1Q9UNQ2 313 aaKnown RBP13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 MINOS1-NBL1R4GNA1 71 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 TGP01266 2768 aa13.86□□□□□ -0.19
CDC42BPB-208ENST00000561271 IRGMA1A4Y4 181 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 FUOMA2VDF0 154 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 H0YJX3 145 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 MAGEB3O15480 346 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 CD2P06729 351 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 PTGFRP43088 359 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 OR3A4PP47883 348 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 ADARB1P78563 741 aaKnown RBP13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 DEFA6Q01524 100 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 HERPUD1Q15011 391 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 C2orf68Q2NKX9 166 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 PIGYQ3MUY2 71 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 TTC23Q5W5X9 447 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 HEPN1Q6WQI6 88 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 PACRGLQ8N7B6 248 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 ZFP41Q8N8Y5 198 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 SETD9Q8NE22 299 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 PXT1Q8NFP0 134 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 SMIM19Q96E16 107 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 ZNF286AQ9HBT8 521 aa13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 EXOSC1Q9Y3B2 195 aaKnown RBP13.85□□□□□ -0.19
CDC42BPB-208ENST00000561271 NOTCH3Q9UM47 2321 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 GNAO1P09471 354 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 VSIG10L2P0DP72 767 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 HTR1DP28221 377 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 GLP1RP43220 463 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 RSU1Q15404 277 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 PAN3Q58A45 887 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 DDI2Q5TDH0 399 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 ELP2Q6IA86 826 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 C11orf88Q6PI97 169 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 Q6ZTK2 550 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 DHRSXQ8N5I4 330 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 FAM110DQ8TAY7 271 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 CORO2AQ92828 525 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 C8orf4Q9NR00 106 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 TAS2R3Q9NYW6 316 aa13.84□□□□□ -0.19
CDC42BPB-208ENST00000561271 TRAV24A0A0B4J272 114 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 OGG1O15527 345 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 CDRT1O95170 752 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 HTR3BO95264 441 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 CSF1P09603 554 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 DYNLT3P51808 116 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 PPP3R1P63098 170 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 IL13RA2Q14627 380 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 UTF1Q5T230 341 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 OR52W1Q6IF63 320 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 ABHD12Q8N2K0 398 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 OR51T1Q8NGJ9 327 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 TMEM80Q96HE8 168 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 ZNF581Q9P0T4 197 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms