RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	SHANK3	Q9BYB0	1731 aa		0.89	□□□□□ -2.27
SLTM-223	ENST00000560532	TTC41P	Q6P2S7	1318 aa		0.89	□□□□□ -2.27
SLTM-223	ENST00000560532	USP42	Q9H9J4	1324 aa	Known RBP	0.89	□□□□□ -2.27
SLTM-223	ENST00000560532	AQR	O60306	1485 aa	Known RBP eCLIP	0.88	□□□□□ -2.27	2e-12	■□□□□ 10.4
SLTM-223	ENST00000560532		A0A0A6YYH2	397 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	SERTM2	A0A1B0GWG4	89 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532		A6NJ64	397 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	CENPX	A8MT69	81 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	GOLGA6L19	H0YKK7	550 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	GOLGA8T	H3BQL2	631 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	RGS5	O15539	181 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	SLC37A4	O43826	429 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	NIPSNAP2	O75323	286 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	PSIP1	O75475	530 aa	Known RBP	0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	MYO1D	O94832	1006 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	CDK14	O94921	469 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	CSTA	P01040	98 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	CRYGC	P07315	174 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	RHOC	P08134	193 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	OCM	P0CE72	109 aa	Predicted RBP	0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	STAG3L2	P0CL84	134 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	CTLA4	P16410	223 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	HTR2B	P41595	481 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	KCNJ3	P48549	501 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	CLDN8	P56748	225 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	MLF1	P58340	268 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	PSMC5	P62195	406 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	COTL1	Q14019	142 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	TOMM34	Q15785	309 aa	Predicted RBP	0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	RAB11B	Q15907	218 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	TMEM241	Q24JQ0	296 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	PIP5KL1	Q5T9C9	394 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	MLIP	Q5VWP3	458 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	ULK3	Q6PHR2	472 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	KATNAL2	Q8IYT4	538 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	HS3ST5	Q8IZT8	346 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	KRT222	Q8N1A0	295 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	TCAIM	Q8N3R3	496 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	ZNF321P	Q8N8H1	164 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	CCDC112	Q8NEF3	446 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	OR5T3	Q8NGG3	340 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	DDI1	Q8WTU0	396 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	CCDC124	Q96CT7	223 aa	Known RBP	0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	CYTH2	Q99418	400 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	C20orf144	Q9BQM9	153 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	CCDC94	Q9BW85	323 aa	Predicted RBP	0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	VCX3B	Q9H321	246 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	GOLPH3	Q9H4A6	298 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	METTL8	Q9H825	291 aa	Known RBP	0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	PSTPIP2	Q9H939	334 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	NKIRAS1	Q9NYS0	192 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	OR5V1	Q9UGF6	321 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	C15orf41	Q9Y2V0	281 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	ZNF706	Q9Y5V0	76 aa	Predicted RBP	0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	NOS1	P29475	1434 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532	MYO3B	Q8WXR4	1341 aa		0.88	□□□□□ -2.27
SLTM-223	ENST00000560532		A0A1W2PRF3	423 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532		A0A1W2PRM7	423 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	TMEM213	A2RRL7	107 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	MGAT4D	A6NG13	374 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	SUPT3H	B4E1H0	165 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532		F8VZ95	297 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	DHRS3	O75911	302 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	RPP14	O95059	124 aa	Known RBP	0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	FADS2	O95864	444 aa	Known RBP	0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	ASS1	P00966	412 aa	Known RBP	0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	MLN	P12872	115 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	PTN	P21246	168 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	ARR3	P36575	388 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	RAP1GDS1	P52306	607 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	CEBPG	P53567	150 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	TSPAN5	P62079	268 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	CTAG1A	P78358	180 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	MRPS25	P82663	173 aa	Known RBP	0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	ST3GAL4	Q11206	333 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	MED21	Q13503	144 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	SAPCD1	Q5SSQ6	148 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	TMEM215	Q68D42	235 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532		Q6ZRU5	148 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	COPS6	Q7L5N1	327 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	TCF23	Q7RTU1	214 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	SETD3	Q86TU7	594 aa	Predicted RBP	0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	RBM45	Q8IUH3	476 aa	Known RBP	0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	CD302	Q8IX05	232 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	MSRB3	Q8IXL7	192 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	PROKR2	Q8NFJ6	384 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	RNASE11	Q8TAA1	199 aa	Known RBP	0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	CCDC12	Q8WUD4	166 aa	Predicted RBP	0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	FAM131C	Q96AQ9	280 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	CHMP6	Q96FZ7	201 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	RILP	Q96NA2	401 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	ACBD6	Q9BR61	282 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	TM6SF2	Q9BZW4	377 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	GAL3ST2	Q9H3Q3	398 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	WDR55	Q9H6Y2	383 aa	Predicted RBP	0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	UCK1	Q9HA47	277 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	SPACA1	Q9HBV2	294 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	VCX3A	Q9NNX9	186 aa		0.87	□□□□□ -2.27
SLTM-223	ENST00000560532	AGPAT3	Q9NRZ7	376 aa		0.87	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms