RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 PCDHB16Q9NRJ7 776 aa6.92□□□□□ -1.3
RABGGTA-217ENST00000560521 LIN7CQ9NUP9 197 aaKnown RBP6.92□□□□□ -1.3
RABGGTA-217ENST00000560521 RBFOX1Q9NWB1 397 aaKnown RBP6.92□□□□□ -1.3
RABGGTA-217ENST00000560521 GLS2Q9UI32 602 aa6.92□□□□□ -1.3
RABGGTA-217ENST00000560521 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.92□□□□□ -1.3
RABGGTA-217ENST00000560521 ODAMA1E959 279 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 NCBP2LA6PVI3 153 aaKnown RBP6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 ENTPD6O75354 484 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 GMNNO75496 209 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 CCNB2O95067 398 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 CGB3P0DN86 165 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 CGB7P0DN87 165 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 BCL3P20749 454 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 NFYBP25208 207 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 PTGFRP43088 359 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 MTNR1BP49286 362 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 SNU13P55769 128 aaKnown RBP6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 GNGT1P63211 74 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 RUNX1Q01196 453 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 HAGHQ16775 308 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 ACSM6Q6P461 480 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 CATSPERDQ86XM0 798 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 ZNF679Q8IYX0 411 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 ELMOD2Q8IZ81 293 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 OR8H3Q8N146 312 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 FAM58AQ8N1B3 248 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 Q8N6K4 173 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 BBS1Q8NFJ9 593 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 OR6Q1Q8NGQ2 317 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 LEAP2Q969E1 77 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 ST6GALNAC6Q969X2 333 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 COQ2Q96H96 371 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 KIRREL1Q96J84 757 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 UBE2E2Q96LR5 201 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 OR5B12Q96R08 314 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 HSPB9Q9BQS6 159 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 DGCR6LQ9BY27 220 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 TTTY10Q9BZA0 68 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 PLSCR3Q9NRY6 295 aa6.91□□□□□ -1.3
RABGGTA-217ENST00000560521 IGHV3-72A0A0B4J1Y9 119 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 FUOMA2VDF0 154 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 ZNF729A6NN14 1252 aaPredicted RBP6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 DHRS7CA6NNS2 312 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 PRODHO43272 600 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 ZNF254O75437 659 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 OR2H2O95918 312 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 IFNA6P05013 189 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 PRKACAP17612 351 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 SLC2A5P22732 501 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 RAB7AP51149 207 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 FUT6P51993 359 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 SLURP1P55000 103 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 CDC42P60953 191 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 ROM1Q03395 351 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 MADCAM1Q13477 382 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 ZNF829Q3KNS6 432 aaPredicted RBP6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 LYPD6Q86Y78 171 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 CPOQ8IVL8 374 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 IL17DQ8TAD2 202 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 LINC00476Q8WZB0 136 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 KCTD7Q96MP8 289 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 NIPSNAP1Q9BPW8 284 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 ING3Q9NXR8 418 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 KIAA1456Q9P272 454 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 COPS3Q9UNS2 423 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 PSG11Q9UQ72 335 aa6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 AMMECR1Q9Y4X0 333 aaPredicted RBP6.9□□□□□ -1.3
RABGGTA-217ENST00000560521 IGHV1-3A0A0C4DH29 117 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 TRBV2A0A0J9YWF9 115 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 KBTBD11-OT1A0A1B0GTJ5 212 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 LOC110117498-PIK3R3F6TDL0 507 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 SH2D1BO14796 132 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 MAGEB4O15481 346 aaPredicted RBP6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 MPZL2O60487 215 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 E2F6O75461 281 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 ATP5HO75947 161 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 IGF1P05019 195 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 VDAC1P21796 283 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 PPIFP30405 207 aaKnown RBP6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 RIDAP52758 137 aaKnown RBP6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 ISL1P61371 349 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 ZNF816Q0VGE8 651 aaPredicted RBP6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 MICAQ29983 383 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 KRBOX4Q5JUW0 171 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 SPIN3Q5JUX0 258 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 SLC35D3Q5M8T2 416 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 CD300LDQ6UXZ3 194 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 PLEKHG7Q6ZR37 379 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 MOB3BQ86TA1 216 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 Q8IYB0 196 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 TEX47Q8TBZ9 253 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 HAVCR2Q8TDQ0 301 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 NSMCE2Q96MF7 247 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 S1PR3Q99500 378 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 YIPF3Q9GZM5 350 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 ALX4Q9H161 411 aaPredicted RBP6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 PPIL3Q9H2H8 161 aaKnown RBP6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 HMG20AQ9NP66 347 aa6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 EXOSC4Q9NPD3 245 aaKnown RBP6.89□□□□□ -1.31
RABGGTA-217ENST00000560521 TPSG1Q9NRR2 321 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms