RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 KIR3DL3Q8N743 410 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 OR51A4Q8NGJ6 313 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 CITED1Q99966 193 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 C7orf50Q9BRJ6 194 aaKnown RBP11.2□□□□□ -0.62
SMAD3-214ENST00000560402 OR10A2Q9H208 303 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 ABCG5Q9H222 651 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 DIABLOQ9NR28 239 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 RHBDL2Q9NX52 303 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 TAS2R4Q9NYW5 299 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 RPUSD1Q9UJJ7 312 aaKnown RBP11.2□□□□□ -0.62
SMAD3-214ENST00000560402 ZNF391Q9UJN7 358 aa11.2□□□□□ -0.62
SMAD3-214ENST00000560402 TRAV8-7A0A075B6U6 113 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 A0A0U1RQV5 110 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 hCG_38984A0A1B0GV85 526 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 FUOMA2VDF0 154 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 M0QZ24 198 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 SCGNO76038 276 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 SLC2A1P11166 492 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 IGFBP3P17936 291 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-214ENST00000560402 ANOS1P23352 680 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 HTR2CP28335 458 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 HOXA4Q00056 320 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-214ENST00000560402 RELBQ01201 579 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 TMEM69Q5SWH9 247 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 CCBE1Q6UXH8 406 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-214ENST00000560402 ZNF826PQ6ZT77 177 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 FAM57BQ71RH2 274 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 BTN2A1Q7KYR7 527 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 SLC36A1Q7Z2H8 476 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 ZNF554Q86TJ5 538 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 CDH26Q8IXH8 852 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 SCCPDHQ8NBX0 429 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 CSNK2A3Q8NEV1 391 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 OR5H6Q8NGV6 325 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 LRRC29Q8WV35 223 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 ST8SIA4Q92187 359 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 LHX4Q969G2 390 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 C10orf35Q96D05 121 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 CPNE2Q96FN4 548 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-214ENST00000560402 THAP7Q9BT49 309 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-214ENST00000560402 DNTTIP1Q9H147 329 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 TMEM138Q9NPI0 162 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 TNFRSF19Q9NS68 423 aa11.19□□□□□ -0.62
SMAD3-214ENST00000560402 C5orf63A6NC05 138 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 H3BSH0 61 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 GSTZ1O43708 216 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-214ENST00000560402 HNRNPCP07910 306 aaKnown RBP eCLIP11.18□□□□□ -0.621e-6■■■□□ 15.8
SMAD3-214ENST00000560402 GSTT2BP0CG30 244 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 CCL1P22362 96 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 MNDAP41218 407 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 FAM3AP98173 230 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 DEFA6Q01524 100 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 P2RY14Q15391 338 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 PLET1Q6UQ28 207 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 CMTM4Q8IZR5 234 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 JAGN1Q8N5M9 183 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 OR1M1Q8NGA1 313 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 OR8B12Q8NGG6 310 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 OR51E1Q8TCB6 317 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 NPRL2Q8WTW4 380 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 TAF15Q92804 592 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMAD3-214ENST00000560402 FGGYQ96C11 551 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 ORAI1Q96D31 301 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 REEP6Q96HR9 211 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 GFI1Q99684 422 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 UQCC2Q9BRT2 126 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 TLNRD1Q9H1K6 362 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 DPAGT1Q9H3H5 408 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 RGCCQ9H4X1 137 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 CNTD2Q9H8S5 307 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 GPR84Q9NQS5 396 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 TBC1D24Q9ULP9 559 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 MRPS7Q9Y2R9 242 aaKnown RBP11.18□□□□□ -0.62
SMAD3-214ENST00000560402 N6AMT1Q9Y5N5 214 aa11.18□□□□□ -0.62
SMAD3-214ENST00000560402 A0A0A6YYH2 397 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 LINC00854A0A1B0GVQ3 168 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 FAM240BA0A1B0GVZ2 78 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 BTBD17A6NE02 478 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 A6NJ64 397 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 LYRM1O43325 122 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 GPR137BO60478 399 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 FBP1P09467 338 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 ARF6P62330 175 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 WDR82Q6UXN9 313 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 GDPD3Q7L5L3 318 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 VMO1Q7Z5L0 202 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 WDR86Q86TI4 376 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 TOMM5Q8N4H5 51 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 DNAAF1Q8NEP3 725 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 OR10Z1Q8NGY1 313 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 FCAMRQ8WWV6 532 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 PP6455Q8WZ26 134 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 ITFG2Q969R8 447 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 PTX4Q96A99 478 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 FAM3DQ96BQ1 224 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 RTL8AQ9BWD3 113 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 PAPOLGQ9BWT3 736 aaKnown RBP11.17□□□□□ -0.62
SMAD3-214ENST00000560402 RBFOX1Q9NWB1 397 aaKnown RBP11.17□□□□□ -0.62
SMAD3-214ENST00000560402 RNF114Q9Y508 228 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms