RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 CDK5R1Q15078 307 aa16.48■□□□□ 0.23
CHRNA3-207ENST00000559941 OR52W1Q6IF63 320 aa16.48■□□□□ 0.23
CHRNA3-207ENST00000559941 ZNF529Q6P280 563 aa16.48■□□□□ 0.23
CHRNA3-207ENST00000559941 Q8N2B8 174 aa16.48■□□□□ 0.23
CHRNA3-207ENST00000559941 KLHDC1Q8N7A1 406 aa16.48■□□□□ 0.23
CHRNA3-207ENST00000559941 PXT1Q8NFP0 134 aa16.48■□□□□ 0.23
CHRNA3-207ENST00000559941 ZNF702PQ9H963 129 aa16.48■□□□□ 0.23
CHRNA3-207ENST00000559941 DEGS1O15121 323 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 CSF1P09603 554 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 RAB3AP20336 220 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 DCKP27707 260 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 HTR1DP28221 377 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 SLC34A1Q06495 639 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 CCDC58Q4VC31 144 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 PDLIM3Q53GG5 364 aaPredicted RBP16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 PRAMEF5Q5TYX0 476 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 ELP2Q6IA86 826 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 RPL22L1Q6P5R6 122 aaKnown RBP16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 RTN4RL2Q86UN3 420 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 TMEM219Q86XT9 240 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 ABHD12Q8N2K0 398 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 OR4P4Q8NGL7 312 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 FAM110DQ8TAY7 271 aaPredicted RBP16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 RGP1Q92546 391 aaPredicted RBP16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 STMN2Q93045 179 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 CPNE2Q96FN4 548 aaPredicted RBP16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 COQ2Q96H96 371 aa16.47■□□□□ 0.23
CHRNA3-207ENST00000559941 ODAMA1E959 279 aa16.46■□□□□ 0.23
CHRNA3-207ENST00000559941 JUNBP17275 347 aaPredicted RBP16.46■□□□□ 0.23
CHRNA3-207ENST00000559941 CDK2P24941 298 aa16.46■□□□□ 0.23
CHRNA3-207ENST00000559941 SOX2P48431 317 aa16.46■□□□□ 0.23
CHRNA3-207ENST00000559941 ETV1P50549 477 aa16.46■□□□□ 0.23
CHRNA3-207ENST00000559941 KRBOX4Q5JUW0 171 aa16.46■□□□□ 0.23
CHRNA3-207ENST00000559941 XAF1Q6GPH4 301 aa16.46■□□□□ 0.23
CHRNA3-207ENST00000559941 BAIAP2L2Q6UXY1 529 aa16.46■□□□□ 0.23
CHRNA3-207ENST00000559941 OR51A2Q8NGJ7 313 aa16.46■□□□□ 0.23
CHRNA3-207ENST00000559941 GPR148Q8TDV2 347 aa16.46■□□□□ 0.23
CHRNA3-207ENST00000559941 SERTAD4Q9NUC0 356 aa16.46■□□□□ 0.23
CHRNA3-207ENST00000559941 IRGMA1A4Y4 181 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 FAM90A22PA8MWA6 464 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 F2RL2O00254 374 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 GABRPO00591 440 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 MAGEB3O15480 346 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 CD2P06729 351 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 VSIG10L2P0DP72 767 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 CD34P28906 385 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 GDNFP39905 211 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 BDH1Q02338 343 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 TMPRSS11AQ6ZMR5 421 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 C11orf44Q8N8P7 122 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 Q8NFD4 153 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 OR51T1Q8NGJ9 327 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 CNIH3Q8TBE1 160 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 ZNF596Q8TC21 504 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 GPER1Q99527 375 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 PRSS22Q9GZN4 317 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 TAS2R4Q9NYW5 299 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 DPM3Q9P2X0 92 aa16.45■□□□□ 0.22
CHRNA3-207ENST00000559941 TGP01266 2768 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 ZNF729A6NN14 1252 aaPredicted RBP16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 H0YJX3 145 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 CLIC3O95833 236 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 IGLV1-47P01700 117 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 PTGFRP43088 359 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 HABP2Q14520 560 aaPredicted RBP16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 IL13RA2Q14627 380 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 ATXN7L3Q14CW9 347 aaPredicted RBP16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 OR2G6Q5TZ20 316 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 TTC23Q5W5X9 447 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 ASCL4Q6XD76 172 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 SATL1Q86VE3 508 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 TNFAIP8L1Q8WVP5 186 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 NR1H4Q96RI1 486 aaPredicted RBP16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 ING3Q9NXR8 418 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 OR6C3Q9NZP0 311 aa16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 DIMT1Q9UNQ2 313 aaKnown RBP16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 EXOSC1Q9Y3B2 195 aaKnown RBP16.44■□□□□ 0.22
CHRNA3-207ENST00000559941 OGG1O15527 345 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 ALDOBP05062 364 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 CGB3P0DN86 165 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 CGB7P0DN87 165 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 LRRC36Q1X8D7 754 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 C17orf58Q2M2W7 97 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 HIST2H2BDQ6DRA6 164 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 PACRGLQ8N7B6 248 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 OR4D6Q8NGJ1 314 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 TMEM106AQ96A25 262 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 PPIL3Q9H2H8 161 aaKnown RBP16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 NCOR1P1Q9H4R4 102 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 ZNF286AQ9HBT8 521 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 C8orf4Q9NR00 106 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 BABAM2Q9NXR7 383 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 SIRT4Q9Y6E7 314 aaPredicted RBP16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 PLXNB1O43157 2135 aa16.43■□□□□ 0.22
CHRNA3-207ENST00000559941 A0A087X0M5 115 aa16.42■□□□□ 0.22
CHRNA3-207ENST00000559941 TRAV24A0A0B4J272 114 aa16.42■□□□□ 0.22
CHRNA3-207ENST00000559941 A0A1B0GX30 115 aa16.42■□□□□ 0.22
CHRNA3-207ENST00000559941 H3BUI4 141 aa16.42■□□□□ 0.22
CHRNA3-207ENST00000559941 ADARB1P78563 741 aaKnown RBP16.42■□□□□ 0.22
CHRNA3-207ENST00000559941 RSU1Q15404 277 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms