RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 NDNFQ8TB73 568 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 TSEN15Q8WW01 171 aaKnown RBP14.24□□□□□ -0.13
HDDC3-205ENST00000559898 CLEC7AQ9BXN2 247 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 RANBP3Q9H6Z4 567 aaPredicted RBP14.24□□□□□ -0.13
HDDC3-205ENST00000559898 CLEC2DQ9UHP7 191 aa14.24□□□□□ -0.13
HDDC3-205ENST00000559898 PLXNB1O43157 2135 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 TRAV39A0A0B4J263 110 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 SH2D7A6NKC9 451 aaPredicted RBP14.23□□□□□ -0.13
HDDC3-205ENST00000559898 TMEM212A6NML5 194 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 IGHV3-7P01780 117 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 CSF1P09603 554 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 ZNF529Q6P280 563 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 ABHD12Q8N2K0 398 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 RPS4Y2Q8TD47 263 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 WIPF2Q8TF74 440 aaPredicted RBP14.23□□□□□ -0.13
HDDC3-205ENST00000559898 CORO2AQ92828 525 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 FOXRED1Q96CU9 486 aaPredicted RBP14.23□□□□□ -0.13
HDDC3-205ENST00000559898 NPFFR1Q9GZQ6 430 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 FGF20Q9NP95 211 aaPredicted RBP14.23□□□□□ -0.13
HDDC3-205ENST00000559898 ABCB10Q9NRK6 738 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 DHDHQ9UQ10 334 aa14.23□□□□□ -0.13
HDDC3-205ENST00000559898 UBE2J1Q9Y385 318 aaPredicted RBP14.23□□□□□ -0.13
HDDC3-205ENST00000559898 RPL36Q9Y3U8 105 aaKnown RBP14.23□□□□□ -0.13
HDDC3-205ENST00000559898 TRAV24A0A0B4J272 114 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 ODAMA1E959 279 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 SNTNA6NMZ2 147 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 ADARB2-AS1A8MUL3 147 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 G3V4G9 280 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 OR3A4PP47883 348 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 GBX2P52951 348 aaPredicted RBP14.22□□□□□ -0.13
HDDC3-205ENST00000559898 C2orf68Q2NKX9 166 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 PIGYQ3MUY2 71 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 KRBOX4Q5JUW0 171 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 Q6ZTK2 550 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 SATL1Q86VE3 508 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 SERPINA12Q8IW75 414 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 SAXO1Q8IYX7 474 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 Q8N2B8 174 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 PLPPR1Q8TBJ4 325 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 Q96MT0 163 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 JAM3Q9BX67 310 aa14.22□□□□□ -0.13
HDDC3-205ENST00000559898 SMPD3Q9NY59 655 aaPredicted RBP14.22□□□□□ -0.13
HDDC3-205ENST00000559898 MAGEA13PA6NCF6 341 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 FAM90A22PA8MWA6 464 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 EBAG9O00559 213 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 DEGS1O15121 323 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 MPZL2O60487 215 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 IGLV1-47P01700 117 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 CGB3P0DN86 165 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 CGB7P0DN87 165 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 NSUN5P1Q3KNT7 163 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 MINOS1Q5TGZ0 78 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 LAIR2Q6ISS4 152 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 HEPN1Q6WQI6 88 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 LIAT1Q6ZQX7 453 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 ZFP41Q8N8Y5 198 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 OR5D14Q8NGL3 314 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 OR13A1Q8NGR1 328 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 LEAP2Q969E1 77 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 RAB18Q9NP72 206 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 INPP5EQ9NRR6 644 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 GLS2Q9UI32 602 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 MINOS1-NBL1R4GNA1 71 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 DNAH3Q8TD57 4116 aa14.21□□□□□ -0.13
HDDC3-205ENST00000559898 TRGV10A0A0A0MS01 117 aa14.2□□□□□ -0.14
HDDC3-205ENST00000559898 H0YJX3 145 aa14.2□□□□□ -0.14
HDDC3-205ENST00000559898 F2RL2O00254 374 aa14.2□□□□□ -0.14
HDDC3-205ENST00000559898 ALX3O95076 343 aa14.2□□□□□ -0.14
HDDC3-205ENST00000559898 CDRT1O95170 752 aa14.2□□□□□ -0.14
HDDC3-205ENST00000559898 PRB2P02812 416 aaPredicted RBP14.2□□□□□ -0.14
HDDC3-205ENST00000559898 RPSAP08865 295 aaKnown RBP14.2□□□□□ -0.14
HDDC3-205ENST00000559898 CCDC159P0C7I6 412 aa14.2□□□□□ -0.14
HDDC3-205ENST00000559898 DYNLT3P51808 116 aa14.2□□□□□ -0.14
HDDC3-205ENST00000559898 KLHL22Q53GT1 634 aa14.2□□□□□ -0.14
HDDC3-205ENST00000559898 FAM53AQ6NSI3 398 aaPredicted RBP14.2□□□□□ -0.14
HDDC3-205ENST00000559898 TNFAIP8L1Q8WVP5 186 aa14.2□□□□□ -0.14
HDDC3-205ENST00000559898 KIF25Q9UIL4 384 aa14.2□□□□□ -0.14
HDDC3-205ENST00000559898 A0A1W2PP11 408 aa14.19□□□□□ -0.14
HDDC3-205ENST00000559898 HTR1DP28221 377 aa14.19□□□□□ -0.14
HDDC3-205ENST00000559898 DIAPH2-AS1Q14236 149 aa14.19□□□□□ -0.14
HDDC3-205ENST00000559898 C10orf99Q6UWK7 81 aa14.19□□□□□ -0.14
HDDC3-205ENST00000559898 CYGBQ8WWM9 190 aa14.19□□□□□ -0.14
HDDC3-205ENST00000559898 RBMXL1Q96E39 390 aaKnown RBP14.19□□□□□ -0.14
HDDC3-205ENST00000559898 MRPL48Q96GC5 212 aaKnown RBP14.19□□□□□ -0.14
HDDC3-205ENST00000559898 CITED2Q99967 270 aaPredicted RBP14.19□□□□□ -0.14
HDDC3-205ENST00000559898 OCSTAMPQ9BR26 566 aa14.19□□□□□ -0.14
HDDC3-205ENST00000559898 WNT10AQ9GZT5 417 aa14.19□□□□□ -0.14
HDDC3-205ENST00000559898 FAM192AQ9GZU8 254 aa14.19□□□□□ -0.14
HDDC3-205ENST00000559898 MMP28Q9H239 520 aa14.19□□□□□ -0.14
HDDC3-205ENST00000559898 TAS2R3Q9NYW6 316 aa14.19□□□□□ -0.14
HDDC3-205ENST00000559898 LY6LH3BQJ8 138 aa14.18□□□□□ -0.14
HDDC3-205ENST00000559898 HTR3BO95264 441 aa14.18□□□□□ -0.14
HDDC3-205ENST00000559898 CSN2P05814 226 aa14.18□□□□□ -0.14
HDDC3-205ENST00000559898 GNAO1P09471 354 aa14.18□□□□□ -0.14
HDDC3-205ENST00000559898 RAB3AP20336 220 aa14.18□□□□□ -0.14
HDDC3-205ENST00000559898 NFYBP25208 207 aa14.18□□□□□ -0.14
HDDC3-205ENST00000559898 PTGFRP43088 359 aa14.18□□□□□ -0.14
HDDC3-205ENST00000559898 GLP1RP43220 463 aa14.18□□□□□ -0.14
HDDC3-205ENST00000559898 MTNR1BP49286 362 aa14.18□□□□□ -0.14
HDDC3-205ENST00000559898 ADARB1P78563 741 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms